Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CHGBP05060 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.91□□□□□ -1.14
CHGBP05060 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CHGBP05060 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.91□□□□□ -1.14
CHGBP05060 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
CHGBP05060 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CHGBP05060 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CHGBP05060 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
CHGBP05060 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CHGBP05060 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
CHGBP05060 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.9□□□□□ -1.14
CHGBP05060 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CHGBP05060 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
CHGBP05060 CASC19-228ENST00000641414 1684 ntBASIC7.9□□□□□ -1.14
CHGBP05060 AC024341.1-201ENST00000526444 1552 ntBASIC7.9□□□□□ -1.14
CHGBP05060 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
CHGBP05060 API5P1-201ENST00000424316 1510 ntBASIC7.9□□□□□ -1.14
CHGBP05060 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CHGBP05060 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CHGBP05060 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CHGBP05060 AC119674.1-204ENST00000641348 1343 ntBASIC7.9□□□□□ -1.14
CHGBP05060 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CHGBP05060 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CHGBP05060 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
CHGBP05060 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CHGBP05060 RNA5SP77-201ENST00000365394 120 ntBASIC7.9□□□□□ -1.14
CHGBP05060 MIR191-201ENST00000384873 92 ntBASIC7.9□□□□□ -1.14
CHGBP05060 AC008171.1-201ENST00000395058 200 ntBASIC7.9□□□□□ -1.14
CHGBP05060 AC003045.1-201ENST00000398779 713 ntBASIC7.9□□□□□ -1.14
CHGBP05060 AL133260.1-201ENST00000405720 405 ntBASIC7.9□□□□□ -1.14
CHGBP05060 MTATP6P31-201ENST00000406985 692 ntBASIC7.9□□□□□ -1.14
CHGBP05060 RN7SKP146-201ENST00000410242 334 ntBASIC7.9□□□□□ -1.14
CHGBP05060 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC7.9□□□□□ -1.14
CHGBP05060 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC7.9□□□□□ -1.14
CHGBP05060 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC7.9□□□□□ -1.14
CHGBP05060 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.9□□□□□ -1.14
CHGBP05060 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
CHGBP05060 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.9□□□□□ -1.14
CHGBP05060 GTF2IP14-201ENST00000441415 586 ntBASIC7.9□□□□□ -1.14
CHGBP05060 AL356121.1-201ENST00000442911 156 ntBASIC7.9□□□□□ -1.14
CHGBP05060 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC7.9□□□□□ -1.14
CHGBP05060 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.9□□□□□ -1.14
CHGBP05060 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC7.9□□□□□ -1.14
CHGBP05060 AC004890.1-201ENST00000461005 181 ntBASIC7.9□□□□□ -1.14
CHGBP05060 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
CHGBP05060 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.9□□□□□ -1.14
CHGBP05060 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC7.9□□□□□ -1.14
CHGBP05060 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC7.9□□□□□ -1.14
CHGBP05060 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CHGBP05060 AL136520.1-202ENST00000555494 763 ntBASIC7.9□□□□□ -1.14
CHGBP05060 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC7.9□□□□□ -1.14
CHGBP05060 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC7.9□□□□□ -1.14
CHGBP05060 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.9□□□□□ -1.14
CHGBP05060 AC245128.3-201ENST00000594721 748 ntBASIC7.9□□□□□ -1.14
CHGBP05060 AC098483.2-201ENST00000603158 454 ntBASIC7.9□□□□□ -1.14
CHGBP05060 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
CHGBP05060 AC009269.6-201ENST00000621778 588 ntBASIC7.9□□□□□ -1.14
CHGBP05060 AP000770.2-201ENST00000623694 100 ntBASIC7.9□□□□□ -1.14
CHGBP05060 AC114546.4-201ENST00000624413 369 ntBASIC7.9□□□□□ -1.14
CHGBP05060 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC7.9□□□□□ -1.14
CHGBP05060 AL139254.3-201ENST00000641097 674 ntBASIC7.9□□□□□ -1.14
CHGBP05060 SAMMSON-214ENST00000641395 1264 ntBASIC7.9□□□□□ -1.14
CHGBP05060 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CHGBP05060 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
CHGBP05060 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CHGBP05060 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CHGBP05060 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.9□□□□□ -1.15
CHGBP05060 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.9□□□□□ -1.15
CHGBP05060 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CHGBP05060 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CHGBP05060 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CHGBP05060 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.89□□□□□ -1.15
CHGBP05060 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CHGBP05060 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.89□□□□□ -1.15
CHGBP05060 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC7.89□□□□□ -1.15
CHGBP05060 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CHGBP05060 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CHGBP05060 UGT2B27P-201ENST00000505092 1620 ntBASIC7.89□□□□□ -1.15
CHGBP05060 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CHGBP05060 TNPO1P2-201ENST00000426249 2665 ntBASIC7.89□□□□□ -1.15
CHGBP05060 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CHGBP05060 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CHGBP05060 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CHGBP05060 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CHGBP05060 AC217777.1-201ENST00000570034 1471 ntBASIC7.89□□□□□ -1.15
CHGBP05060 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
CHGBP05060 AC005702.3-201ENST00000585345 1447 ntBASIC7.89□□□□□ -1.15
CHGBP05060 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.89□□□□□ -1.15
CHGBP05060 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CHGBP05060 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CHGBP05060 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.89□□□□□ -1.15
CHGBP05060 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CHGBP05060 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC7.89□□□□□ -1.15
CHGBP05060 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
CHGBP05060 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CHGBP05060 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
CHGBP05060 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CHGBP05060 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.89□□□□□ -1.15
CHGBP05060 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
CHGBP05060 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms