Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 AC090771.1-201ENST00000585803 1618 ntBASIC6.33□□□□□ -1.4
RIF1Q5UIP0 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 AC010401.2-201ENST00000575137 4934 ntBASIC6.33□□□□□ -1.4
RIF1Q5UIP0 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 RNA5SP438-201ENST00000516561 112 ntBASIC6.33□□□□□ -1.4
RIF1Q5UIP0 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 AC013283.1-201ENST00000557282 492 ntBASIC6.33□□□□□ -1.4
RIF1Q5UIP0 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 TSHZ2-205ENST00000626626 670 ntBASIC6.33□□□□□ -1.4
RIF1Q5UIP0 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 AC087501.5-201ENST00000607496 2374 ntBASIC6.33□□□□□ -1.4
RIF1Q5UIP0 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 AC009169.1-201ENST00000563784 1377 ntBASIC6.33□□□□□ -1.4
RIF1Q5UIP0 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 AC096992.2-201ENST00000609553 1684 ntBASIC6.33□□□□□ -1.4
RIF1Q5UIP0 R3HDM2P1-201ENST00000505381 1960 ntBASIC6.33□□□□□ -1.4
RIF1Q5UIP0 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 AP000542.3-201ENST00000623391 6114 ntBASIC6.33□□□□□ -1.4
RIF1Q5UIP0 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 RN7SKP281-201ENST00000410472 352 ntBASIC6.33□□□□□ -1.4
RIF1Q5UIP0 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 AC139272.1-201ENST00000505516 640 ntBASIC6.33□□□□□ -1.4
RIF1Q5UIP0 AC131392.1-201ENST00000506490 633 ntBASIC6.33□□□□□ -1.4
RIF1Q5UIP0 RPL10P18-201ENST00000519384 309 ntBASIC6.33□□□□□ -1.4
RIF1Q5UIP0 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 ZNF322P1-201ENST00000568013 1209 ntBASIC6.33□□□□□ -1.4
RIF1Q5UIP0 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 AL049539.1-201ENST00000611964 459 ntBASIC6.33□□□□□ -1.4
RIF1Q5UIP0 MIR6809-201ENST00000612189 116 ntBASIC6.33□□□□□ -1.4
RIF1Q5UIP0 AL035661.1-201ENST00000620459 1144 ntBASIC6.33□□□□□ -1.4
RIF1Q5UIP0 AL136228.1-201ENST00000622221 319 ntBASIC6.33□□□□□ -1.4
RIF1Q5UIP0 AP001784.1-201ENST00000624107 428 ntBASIC6.33□□□□□ -1.4
RIF1Q5UIP0 AC010886.1-201ENST00000437380 2869 ntBASIC6.33□□□□□ -1.4
RIF1Q5UIP0 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 AL512662.1-201ENST00000624850 2251 ntBASIC6.33□□□□□ -1.4
RIF1Q5UIP0 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 RNFT1P3-201ENST00000340898 1052 ntBASIC6.32□□□□□ -1.4
RIF1Q5UIP0 RNA5SP132-201ENST00000364725 118 ntBASIC6.32□□□□□ -1.4
RIF1Q5UIP0 RN7SKP59-201ENST00000410520 314 ntBASIC6.32□□□□□ -1.4
RIF1Q5UIP0 FAR2P2-201ENST00000413041 594 ntBASIC6.32□□□□□ -1.4
RIF1Q5UIP0 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 FAR2P4-202ENST00000425399 584 ntBASIC6.32□□□□□ -1.4
RIF1Q5UIP0 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 FAR2P1-206ENST00000449736 709 ntBASIC6.32□□□□□ -1.4
RIF1Q5UIP0 AC133965.1-201ENST00000452984 354 ntBASIC6.32□□□□□ -1.4
RIF1Q5UIP0 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 IGHVIII-67-3-201ENST00000517650 232 ntBASIC6.32□□□□□ -1.4
RIF1Q5UIP0 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 AL589674.2-201ENST00000604304 337 ntBASIC6.32□□□□□ -1.4
RIF1Q5UIP0 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 LINC01427-204ENST00000635299 1978 ntTSL 5 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 CHRDL1-203ENST00000394797 2413 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 RPA2P2-201ENST00000419698 796 ntBASIC6.32□□□□□ -1.4
RIF1Q5UIP0 AC093155.2-201ENST00000420734 937 ntBASIC6.32□□□□□ -1.4
RIF1Q5UIP0 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 AC002486.2-201ENST00000447806 590 ntBASIC6.32□□□□□ -1.4
RIF1Q5UIP0 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 944 ms