RNA–Protein interactions for RNA: ENST00000425350.1

LINC00462-201, long intergenic non-protein coding RNA 462, humanhuman

TSL 1 (best) BASIC

Gene LINC00462, Length 962 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00462-201ENST00000425350 AEBP2Q6ZN18 517 aaPredicted RBP29.05■■■□□ 2.24
LINC00462-201ENST00000425350 CHIC1Q5VXU3 224 aa27.72■■■□□ 2.03
LINC00462-201ENST00000425350 SENP3Q9H4L4 574 aaPredicted RBP24.85■■□□□ 1.57
LINC00462-201ENST00000425350 PHF23Q9BUL5 403 aaPredicted RBP24.48■■□□□ 1.51
LINC00462-201ENST00000425350 FOXD1Q16676 465 aa23.09■■□□□ 1.29
LINC00462-201ENST00000425350 PLPPR3Q6T4P5 718 aa22.21■■□□□ 1.15
LINC00462-201ENST00000425350 MSH5O43196 834 aa21.65■■□□□ 1.06
LINC00462-201ENST00000425350 PPP6R1Q9UPN7 881 aa21.61■■□□□ 1.05
LINC00462-201ENST00000425350 PIAS4Q8N2W9 510 aaPredicted RBP21.6■■□□□ 1.05
LINC00462-201ENST00000425350 ADRA2BP18089 450 aa21.54■■□□□ 1.04
LINC00462-201ENST00000425350 POTEDQ86YR6 584 aa20.92■□□□□ 0.94
LINC00462-201ENST00000425350 SCAF1Q9H7N4 1312 aaKnown RBP19.82■□□□□ 0.76
LINC00462-201ENST00000425350 MAPK8IP2Q13387 824 aaPredicted RBP19.74■□□□□ 0.75
LINC00462-201ENST00000425350 DMRT2Q9Y5R5 561 aa19.7■□□□□ 0.74
LINC00462-201ENST00000425350 PPP4R3CPQ6ZMV5 832 aa19.43■□□□□ 0.7
LINC00462-201ENST00000425350 CNKSR2Q8WXI2 1034 aa19.09■□□□□ 0.65
LINC00462-201ENST00000425350 HOXD11P31277 338 aaPredicted RBP19.02■□□□□ 0.64
LINC00462-201ENST00000425350 RNF216Q9NWF9 866 aaPredicted RBP18.9■□□□□ 0.62
LINC00462-201ENST00000425350 DCAF8L1A6NGE4 600 aa18.81■□□□□ 0.6
LINC00462-201ENST00000425350 NCBP3Q53F19 620 aaKnown RBP18.76■□□□□ 0.59
LINC00462-201ENST00000425350 CACNB1Q02641 598 aaPredicted RBP18.46■□□□□ 0.55
LINC00462-201ENST00000425350 RNF39Q9H2S5 420 aa18.45■□□□□ 0.54
LINC00462-201ENST00000425350 NPM3O75607 178 aaKnown RBP18.44■□□□□ 0.54
LINC00462-201ENST00000425350 DNAJC5BQ9UF47 199 aa18.44■□□□□ 0.54
LINC00462-201ENST00000425350 C1QBPQ07021 282 aaKnown RBP18.22■□□□□ 0.51
LINC00462-201ENST00000425350 KCNA4P22459 653 aa18.13■□□□□ 0.49
LINC00462-201ENST00000425350 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.08■□□□□ 0.48
LINC00462-201ENST00000425350 U3KPZ7 1027 aaPredicted RBP17.72■□□□□ 0.43
LINC00462-201ENST00000425350 SLC4A2P04920 1241 aa17.58■□□□□ 0.4
LINC00462-201ENST00000425350 SPINK5Q9NQ38 1064 aaPredicted RBP17.4■□□□□ 0.38
LINC00462-201ENST00000425350 CAPN15O75808 1086 aa17.38■□□□□ 0.37
LINC00462-201ENST00000425350 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.32■□□□□ 0.36
LINC00462-201ENST00000425350 APLP2Q06481 763 aa17.32■□□□□ 0.36
LINC00462-201ENST00000425350 HNRNPUL2Q1KMD3 747 aaKnown RBP17.32■□□□□ 0.36
LINC00462-201ENST00000425350 DSG3P32926 999 aa17.29■□□□□ 0.36
LINC00462-201ENST00000425350 SAMD1Q6SPF0 538 aaPredicted RBP17.21■□□□□ 0.35
LINC00462-201ENST00000425350 ZNF219Q9P2Y4 722 aaPredicted RBP17.17■□□□□ 0.34
LINC00462-201ENST00000425350 SLC4A1APQ9BWU0 796 aaKnown RBP17.16■□□□□ 0.34
LINC00462-201ENST00000425350 TRHP20396 242 aaPredicted RBP17.11■□□□□ 0.33
LINC00462-201ENST00000425350 MYCNP04198 464 aaPredicted RBP17.1■□□□□ 0.33
LINC00462-201ENST00000425350 ABCB7O75027 752 aa16.95■□□□□ 0.3
LINC00462-201ENST00000425350 FOXD4L1Q9NU39 408 aa16.95■□□□□ 0.3
LINC00462-201ENST00000425350 POLA2Q14181 598 aa16.69■□□□□ 0.26
LINC00462-201ENST00000425350 ZBTB22O15209 634 aa16.66■□□□□ 0.26
LINC00462-201ENST00000425350 ATF5Q9Y2D1 282 aaPredicted RBP16.61■□□□□ 0.25
LINC00462-201ENST00000425350 RBM42Q9BTD8 480 aaKnown RBP16.55■□□□□ 0.24
LINC00462-201ENST00000425350 ATXN8OSP0DMR3 200 aa16.47■□□□□ 0.23
LINC00462-201ENST00000425350 ZBTB12Q9Y330 459 aaPredicted RBP16.45■□□□□ 0.22
LINC00462-201ENST00000425350 POTEHQ6S545 545 aa16.42■□□□□ 0.22
LINC00462-201ENST00000425350 NISCHQ9Y2I1 1504 aa16.24■□□□□ 0.19
LINC00462-201ENST00000425350 AKT1S1Q96B36 256 aa16.17■□□□□ 0.18
LINC00462-201ENST00000425350 OSCARQ8IYS5 282 aa16.15■□□□□ 0.18
LINC00462-201ENST00000425350 CHRDL2Q6WN34 429 aa16.11■□□□□ 0.17
LINC00462-201ENST00000425350 FBLN2P98095 1184 aa16.04■□□□□ 0.16
LINC00462-201ENST00000425350 REM2Q8IYK8 340 aaPredicted RBP15.98■□□□□ 0.15
LINC00462-201ENST00000425350 CSRNP3Q8WYN3 585 aa15.98■□□□□ 0.15
LINC00462-201ENST00000425350 SPDYE2BA6NHP3 402 aa15.92■□□□□ 0.14
LINC00462-201ENST00000425350 SPDYE6P0CI01 402 aa15.92■□□□□ 0.14
LINC00462-201ENST00000425350 SPDYE2Q495Y8 402 aa15.92■□□□□ 0.14
LINC00462-201ENST00000425350 MKRN4PQ13434 485 aaPredicted RBP15.88■□□□□ 0.13
LINC00462-201ENST00000425350 PITPNM1O00562 1244 aa15.8■□□□□ 0.12
LINC00462-201ENST00000425350 EHMT2Q96KQ7 1210 aa15.78■□□□□ 0.12
LINC00462-201ENST00000425350 PIP4P2Q8N4L2 257 aa15.72■□□□□ 0.11
LINC00462-201ENST00000425350 SSUH2Q9Y2M2 353 aa15.71■□□□□ 0.11
LINC00462-201ENST00000425350 ZNF692Q9BU19 519 aaPredicted RBP15.69■□□□□ 0.1
LINC00462-201ENST00000425350 FXR2P51116 673 aaKnown RBP eCLIP15.67■□□□□ 0.1
LINC00462-201ENST00000425350 SPDYE1Q8NFV5 336 aaPredicted RBP15.61■□□□□ 0.09
LINC00462-201ENST00000425350 CLEC11AQ9Y240 323 aa15.51■□□□□ 0.07
LINC00462-201ENST00000425350 PABPN1Q86U42 306 aaKnown RBP eCLIP15.46■□□□□ 0.07
LINC00462-201ENST00000425350 SP7Q8TDD2 431 aaPredicted RBP15.45■□□□□ 0.06
LINC00462-201ENST00000425350 HAX1O00165 279 aa15.41■□□□□ 0.06
LINC00462-201ENST00000425350 PRKAR2AP13861 404 aaKnown RBP15.39■□□□□ 0.05
LINC00462-201ENST00000425350 PRR29P0C7W0 189 aa15.3■□□□□ 0.04
LINC00462-201ENST00000425350 SPDYE4A6NLX3 237 aa15.19■□□□□ 0.02
LINC00462-201ENST00000425350 CHADLQ6NUI6 762 aa15.19■□□□□ 0.02
LINC00462-201ENST00000425350 EVX2Q03828 476 aa15.18■□□□□ 0.02
LINC00462-201ENST00000425350 C19orf67A6NJJ6 358 aa15.16■□□□□ 0.02
LINC00462-201ENST00000425350 STAG3Q9UJ98 1225 aa15.12■□□□□ 0.01
LINC00462-201ENST00000425350 FARP1Q9Y4F1 1045 aaPredicted RBP15.03■□□□□ -0
LINC00462-201ENST00000425350 CREBZFQ9NS37 354 aa14.93□□□□□ -0.02
LINC00462-201ENST00000425350 CD44P16070 742 aaKnown RBP14.92□□□□□ -0.02
LINC00462-201ENST00000425350 GABBR2O75899 941 aa14.89□□□□□ -0.03
LINC00462-201ENST00000425350 PROM2Q8N271 834 aa14.89□□□□□ -0.03
LINC00462-201ENST00000425350 CLCN6P51797 869 aa14.81□□□□□ -0.04
LINC00462-201ENST00000425350 ZNF579Q8NAF0 562 aaKnown RBP14.72□□□□□ -0.05
LINC00462-201ENST00000425350 NPM1P06748 294 aaKnown RBP eCLIP14.71□□□□□ -0.05
LINC00462-201ENST00000425350 MNX1P50219 401 aaPredicted RBP14.71□□□□□ -0.05
LINC00462-201ENST00000425350 ZRANB1Q9UGI0 708 aa14.71□□□□□ -0.05
LINC00462-201ENST00000425350 PAK3O75914 559 aaPredicted RBP14.66□□□□□ -0.06
LINC00462-201ENST00000425350 POTEIP0CG38 1075 aa14.56□□□□□ -0.08
LINC00462-201ENST00000425350 DCBLD2Q96PD2 775 aa14.52□□□□□ -0.09
LINC00462-201ENST00000425350 PLEKHG5O94827 1062 aa14.51□□□□□ -0.09
LINC00462-201ENST00000425350 FKBP8Q14318 412 aa14.49□□□□□ -0.09
LINC00462-201ENST00000425350 GALR2O43603 387 aaPredicted RBP14.48□□□□□ -0.09
LINC00462-201ENST00000425350 PHF12Q96QT6 1004 aa14.48□□□□□ -0.09
LINC00462-201ENST00000425350 LHX8Q68G74 356 aa14.47□□□□□ -0.09
LINC00462-201ENST00000425350 MIER1Q8N108 512 aa14.46□□□□□ -0.09
LINC00462-201ENST00000425350 PLCD3Q8N3E9 789 aa14.37□□□□□ -0.11
LINC00462-201ENST00000425350 TSPYL2Q9H2G4 693 aaPredicted RBP14.37□□□□□ -0.11
LINC00462-201ENST00000425350 CCDC61Q9Y6R9 512 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms