Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGA3Q9Y5H0 KRASP1-201ENST00000407852 552 ntBASIC19.26■□□□□ 0.67
PCDHGA3Q9Y5H0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA3Q9Y5H0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHGA3Q9Y5H0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA3Q9Y5H0 AC211429.1-201ENST00000415277 523 ntBASIC19.26■□□□□ 0.67
PCDHGA3Q9Y5H0 ECEL1P3-201ENST00000427961 737 ntBASIC19.26■□□□□ 0.67
PCDHGA3Q9Y5H0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA3Q9Y5H0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.26■□□□□ 0.67
PCDHGA3Q9Y5H0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGA3Q9Y5H0 BX088651.1-201ENST00000540551 451 ntBASIC19.26■□□□□ 0.67
PCDHGA3Q9Y5H0 RARRES2P10-201ENST00000564312 460 ntBASIC19.26■□□□□ 0.67
PCDHGA3Q9Y5H0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
PCDHGA3Q9Y5H0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA3Q9Y5H0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.26■□□□□ 0.67
PCDHGA3Q9Y5H0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA3Q9Y5H0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA3Q9Y5H0 FEM1AP1-201ENST00000431297 1995 ntBASIC19.26■□□□□ 0.67
PCDHGA3Q9Y5H0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA3Q9Y5H0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA3Q9Y5H0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 LINC01023-201ENST00000606054 436 ntBASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGA3Q9Y5H0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA3Q9Y5H0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA3Q9Y5H0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA3Q9Y5H0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA3Q9Y5H0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA3Q9Y5H0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA3Q9Y5H0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA3Q9Y5H0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA3Q9Y5H0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA3Q9Y5H0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA3Q9Y5H0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA3Q9Y5H0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA3Q9Y5H0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PCDHGA3Q9Y5H0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA3Q9Y5H0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA3Q9Y5H0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA3Q9Y5H0 MIR4785-201ENST00000585005 73 ntBASIC19.24■□□□□ 0.67
PCDHGA3Q9Y5H0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHGA3Q9Y5H0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PCDHGA3Q9Y5H0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PCDHGA3Q9Y5H0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA3Q9Y5H0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA3Q9Y5H0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA3Q9Y5H0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA3Q9Y5H0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 TSPY7P-201ENST00000431358 1114 ntBASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 FAM210CP-201ENST00000445714 574 ntBASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA3Q9Y5H0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms