Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MRPS28Q9Y2Q9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
MRPS28Q9Y2Q9 PTBP1P-201ENST00000554374 1601 ntBASIC17.06■□□□□ 0.32
MRPS28Q9Y2Q9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MRPS28Q9Y2Q9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
MRPS28Q9Y2Q9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MRPS28Q9Y2Q9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MRPS28Q9Y2Q9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MRPS28Q9Y2Q9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 KRT16P6-202ENST00000425692 1426 ntBASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 KRT8P17-201ENST00000453110 1448 ntBASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 AL162412.1-201ENST00000567129 965 ntBASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.05■□□□□ 0.32
MRPS28Q9Y2Q9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 AC016405.3-201ENST00000607710 860 ntBASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRPS28Q9Y2Q9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MRPS28Q9Y2Q9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MRPS28Q9Y2Q9 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MRPS28Q9Y2Q9 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.03■□□□□ 0.32
MRPS28Q9Y2Q9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MRPS28Q9Y2Q9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
MRPS28Q9Y2Q9 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MRPS28Q9Y2Q9 TNXA-203ENST00000507684 2038 ntBASIC17.03■□□□□ 0.32
MRPS28Q9Y2Q9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.03■□□□□ 0.32
MRPS28Q9Y2Q9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MRPS28Q9Y2Q9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MRPS28Q9Y2Q9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MRPS28Q9Y2Q9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.03■□□□□ 0.32
MRPS28Q9Y2Q9 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.03■□□□□ 0.32
MRPS28Q9Y2Q9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.03■□□□□ 0.32
MRPS28Q9Y2Q9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
MRPS28Q9Y2Q9 AL031963.3-201ENST00000606441 850 ntBASIC17.03■□□□□ 0.32
MRPS28Q9Y2Q9 AC013268.1-206ENST00000638368 961 ntBASIC17.03■□□□□ 0.32
MRPS28Q9Y2Q9 AC112229.1-201ENST00000639295 961 ntBASIC17.03■□□□□ 0.32
MRPS28Q9Y2Q9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MRPS28Q9Y2Q9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.03■□□□□ 0.32
MRPS28Q9Y2Q9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MRPS28Q9Y2Q9 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.03■□□□□ 0.32
MRPS28Q9Y2Q9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MRPS28Q9Y2Q9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MRPS28Q9Y2Q9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MRPS28Q9Y2Q9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MRPS28Q9Y2Q9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MRPS28Q9Y2Q9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
MRPS28Q9Y2Q9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MRPS28Q9Y2Q9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MRPS28Q9Y2Q9 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.32
MRPS28Q9Y2Q9 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
MRPS28Q9Y2Q9 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MRPS28Q9Y2Q9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms