Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CDK11AQ9UQ88 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CDK11AQ9UQ88 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
CDK11AQ9UQ88 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
CDK11AQ9UQ88 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
CDK11AQ9UQ88 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC30.78■■■□□ 2.52
CDK11AQ9UQ88 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC30.78■■■□□ 2.52
CDK11AQ9UQ88 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC30.78■■■□□ 2.52
CDK11AQ9UQ88 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
CDK11AQ9UQ88 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
CDK11AQ9UQ88 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC30.78■■■□□ 2.52
CDK11AQ9UQ88 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC30.78■■■□□ 2.52
CDK11AQ9UQ88 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
CDK11AQ9UQ88 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
CDK11AQ9UQ88 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
CDK11AQ9UQ88 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
CDK11AQ9UQ88 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
CDK11AQ9UQ88 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC30.78■■■□□ 2.52
CDK11AQ9UQ88 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CDK11AQ9UQ88 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CDK11AQ9UQ88 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC30.77■■■□□ 2.52
CDK11AQ9UQ88 AC018553.1-201ENST00000616682 1458 ntBASIC30.77■■■□□ 2.52
CDK11AQ9UQ88 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC30.77■■■□□ 2.52
CDK11AQ9UQ88 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CDK11AQ9UQ88 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
CDK11AQ9UQ88 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CDK11AQ9UQ88 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC30.77■■■□□ 2.52
CDK11AQ9UQ88 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC30.77■■■□□ 2.52
CDK11AQ9UQ88 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC30.77■■■□□ 2.52
CDK11AQ9UQ88 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
CDK11AQ9UQ88 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CDK11AQ9UQ88 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CDK11AQ9UQ88 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
CDK11AQ9UQ88 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CDK11AQ9UQ88 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CDK11AQ9UQ88 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC30.77■■■□□ 2.52
CDK11AQ9UQ88 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
CDK11AQ9UQ88 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC30.76■■■□□ 2.51
CDK11AQ9UQ88 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CDK11AQ9UQ88 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
CDK11AQ9UQ88 PRR31-201ENST00000371629 978 ntTSL 2 BASIC30.76■■■□□ 2.51
CDK11AQ9UQ88 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CDK11AQ9UQ88 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
CDK11AQ9UQ88 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC30.76■■■□□ 2.51
CDK11AQ9UQ88 LTBR-211ENST00000543190 785 ntTSL 3 BASIC30.76■■■□□ 2.51
CDK11AQ9UQ88 LGALS8-AS1-201ENST00000487567 1457 ntBASIC30.76■■■□□ 2.51
CDK11AQ9UQ88 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC30.76■■■□□ 2.51
CDK11AQ9UQ88 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC30.75■■■□□ 2.51
CDK11AQ9UQ88 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CDK11AQ9UQ88 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CDK11AQ9UQ88 LIN28AP1-201ENST00000429574 405 ntBASIC30.75■■■□□ 2.51
CDK11AQ9UQ88 AC097488.1-201ENST00000507834 756 ntBASIC30.75■■■□□ 2.51
CDK11AQ9UQ88 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC30.75■■■□□ 2.51
CDK11AQ9UQ88 FP700111.2-201ENST00000619190 1892 ntBASIC30.75■■■□□ 2.51
CDK11AQ9UQ88 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
CDK11AQ9UQ88 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CDK11AQ9UQ88 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC30.75■■■□□ 2.51
CDK11AQ9UQ88 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CDK11AQ9UQ88 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC30.74■■■□□ 2.51
CDK11AQ9UQ88 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC30.74■■■□□ 2.51
CDK11AQ9UQ88 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC30.74■■■□□ 2.51
CDK11AQ9UQ88 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CDK11AQ9UQ88 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
CDK11AQ9UQ88 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
CDK11AQ9UQ88 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC30.74■■■□□ 2.51
CDK11AQ9UQ88 NTF6B-201ENST00000591913 560 ntBASIC30.74■■■□□ 2.51
CDK11AQ9UQ88 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC30.74■■■□□ 2.51
CDK11AQ9UQ88 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CDK11AQ9UQ88 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CDK11AQ9UQ88 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
CDK11AQ9UQ88 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CDK11AQ9UQ88 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CDK11AQ9UQ88 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CDK11AQ9UQ88 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC30.73■■■□□ 2.51
CDK11AQ9UQ88 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CDK11AQ9UQ88 AC128688.1-201ENST00000487626 519 ntBASIC30.73■■■□□ 2.51
CDK11AQ9UQ88 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
CDK11AQ9UQ88 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CDK11AQ9UQ88 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CDK11AQ9UQ88 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
CDK11AQ9UQ88 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CDK11AQ9UQ88 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
CDK11AQ9UQ88 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CDK11AQ9UQ88 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CDK11AQ9UQ88 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CDK11AQ9UQ88 GOLGA6L3-201ENST00000507199 1679 ntBASIC30.72■■■□□ 2.51
CDK11AQ9UQ88 EP400NL-214ENST00000641289 2402 ntBASIC30.72■■■□□ 2.51
CDK11AQ9UQ88 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CDK11AQ9UQ88 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CDK11AQ9UQ88 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
CDK11AQ9UQ88 ATP5G1P1-201ENST00000448724 379 ntBASIC30.72■■■□□ 2.51
CDK11AQ9UQ88 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CDK11AQ9UQ88 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC30.72■■■□□ 2.51
CDK11AQ9UQ88 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
CDK11AQ9UQ88 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
CDK11AQ9UQ88 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CDK11AQ9UQ88 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CDK11AQ9UQ88 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
CDK11AQ9UQ88 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC30.72■■■□□ 2.51
CDK11AQ9UQ88 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms