Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LHX6Q9UPM6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LHX6Q9UPM6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LHX6Q9UPM6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LHX6Q9UPM6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.77■□□□□ 0.6
LHX6Q9UPM6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
LHX6Q9UPM6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LHX6Q9UPM6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.77■□□□□ 0.6
LHX6Q9UPM6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.77■□□□□ 0.6
LHX6Q9UPM6 AC004264.1-201ENST00000608354 794 ntBASIC18.77■□□□□ 0.6
LHX6Q9UPM6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LHX6Q9UPM6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.77■□□□□ 0.6
LHX6Q9UPM6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
LHX6Q9UPM6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LHX6Q9UPM6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.77■□□□□ 0.6
LHX6Q9UPM6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.77■□□□□ 0.6
LHX6Q9UPM6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LHX6Q9UPM6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LHX6Q9UPM6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LHX6Q9UPM6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LHX6Q9UPM6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LHX6Q9UPM6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LHX6Q9UPM6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.76■□□□□ 0.59
LHX6Q9UPM6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.76■□□□□ 0.59
LHX6Q9UPM6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LHX6Q9UPM6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LHX6Q9UPM6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LHX6Q9UPM6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.76■□□□□ 0.59
LHX6Q9UPM6 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.76■□□□□ 0.59
LHX6Q9UPM6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.76■□□□□ 0.59
LHX6Q9UPM6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.76■□□□□ 0.59
LHX6Q9UPM6 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.76■□□□□ 0.59
LHX6Q9UPM6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
LHX6Q9UPM6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LHX6Q9UPM6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LHX6Q9UPM6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LHX6Q9UPM6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
LHX6Q9UPM6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LHX6Q9UPM6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LHX6Q9UPM6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LHX6Q9UPM6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LHX6Q9UPM6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LHX6Q9UPM6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LHX6Q9UPM6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LHX6Q9UPM6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LHX6Q9UPM6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LHX6Q9UPM6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LHX6Q9UPM6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LHX6Q9UPM6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LHX6Q9UPM6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.75■□□□□ 0.59
LHX6Q9UPM6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.75■□□□□ 0.59
LHX6Q9UPM6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.75■□□□□ 0.59
LHX6Q9UPM6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LHX6Q9UPM6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LHX6Q9UPM6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LHX6Q9UPM6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LHX6Q9UPM6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.75■□□□□ 0.59
LHX6Q9UPM6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LHX6Q9UPM6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LHX6Q9UPM6 GUSBP5-202ENST00000510805 1989 ntBASIC18.75■□□□□ 0.59
LHX6Q9UPM6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.75■□□□□ 0.59
LHX6Q9UPM6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LHX6Q9UPM6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 TSPY14P-201ENST00000303979 915 ntBASIC18.74■□□□□ 0.59
LHX6Q9UPM6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 TSPY5P-201ENST00000426936 936 ntBASIC18.74■□□□□ 0.59
LHX6Q9UPM6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 RN7SL275P-201ENST00000582762 335 ntBASIC18.74■□□□□ 0.59
LHX6Q9UPM6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 AC069148.1-201ENST00000608741 768 ntBASIC18.74■□□□□ 0.59
LHX6Q9UPM6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 AC242852.2-201ENST00000615738 1807 ntBASIC18.74■□□□□ 0.59
LHX6Q9UPM6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.74■□□□□ 0.59
LHX6Q9UPM6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LHX6Q9UPM6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LHX6Q9UPM6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms