Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GDF3Q9NR23 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
GDF3Q9NR23 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
GDF3Q9NR23 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GDF3Q9NR23 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
GDF3Q9NR23 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
GDF3Q9NR23 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.91■□□□□ 0.94
GDF3Q9NR23 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
GDF3Q9NR23 FAM201B-201ENST00000458407 597 ntBASIC20.91■□□□□ 0.94
GDF3Q9NR23 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.91■□□□□ 0.94
GDF3Q9NR23 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.91■□□□□ 0.94
GDF3Q9NR23 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
GDF3Q9NR23 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
GDF3Q9NR23 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.91■□□□□ 0.94
GDF3Q9NR23 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.91■□□□□ 0.94
GDF3Q9NR23 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.91■□□□□ 0.94
GDF3Q9NR23 Z82202.1-201ENST00000623446 1880 ntBASIC20.91■□□□□ 0.94
GDF3Q9NR23 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.91■□□□□ 0.94
GDF3Q9NR23 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GDF3Q9NR23 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
GDF3Q9NR23 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.9■□□□□ 0.94
GDF3Q9NR23 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GDF3Q9NR23 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.9■□□□□ 0.94
GDF3Q9NR23 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
GDF3Q9NR23 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
GDF3Q9NR23 MKRN4P-201ENST00000444706 1521 ntBASIC20.9■□□□□ 0.94
GDF3Q9NR23 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.9■□□□□ 0.94
GDF3Q9NR23 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
GDF3Q9NR23 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
GDF3Q9NR23 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GDF3Q9NR23 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.9■□□□□ 0.94
GDF3Q9NR23 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
GDF3Q9NR23 POU5F1P4-201ENST00000413175 1085 ntBASIC20.9■□□□□ 0.94
GDF3Q9NR23 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.9■□□□□ 0.94
GDF3Q9NR23 AC069236.1-201ENST00000604339 616 ntBASIC20.9■□□□□ 0.94
GDF3Q9NR23 OR10C1-204ENST00000622521 1039 ntBASIC20.9■□□□□ 0.94
GDF3Q9NR23 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
GDF3Q9NR23 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GDF3Q9NR23 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.9■□□□□ 0.94
GDF3Q9NR23 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GDF3Q9NR23 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
GDF3Q9NR23 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.9■□□□□ 0.94
GDF3Q9NR23 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.9■□□□□ 0.94
GDF3Q9NR23 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.89■□□□□ 0.94
GDF3Q9NR23 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.89■□□□□ 0.94
GDF3Q9NR23 DPP3P2-201ENST00000416030 1696 ntBASIC20.89■□□□□ 0.94
GDF3Q9NR23 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GDF3Q9NR23 AC093503.3-201ENST00000624917 2352 ntBASIC20.89■□□□□ 0.94
GDF3Q9NR23 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
GDF3Q9NR23 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GDF3Q9NR23 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GDF3Q9NR23 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GDF3Q9NR23 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.89■□□□□ 0.93
GDF3Q9NR23 AC098934.4-201ENST00000564127 592 ntBASIC20.89■□□□□ 0.93
GDF3Q9NR23 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.89■□□□□ 0.93
GDF3Q9NR23 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.89■□□□□ 0.93
GDF3Q9NR23 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GDF3Q9NR23 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
GDF3Q9NR23 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.89■□□□□ 0.93
GDF3Q9NR23 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.89■□□□□ 0.93
GDF3Q9NR23 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GDF3Q9NR23 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GDF3Q9NR23 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.88■□□□□ 0.93
GDF3Q9NR23 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GDF3Q9NR23 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
GDF3Q9NR23 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
GDF3Q9NR23 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GDF3Q9NR23 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
GDF3Q9NR23 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GDF3Q9NR23 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GDF3Q9NR23 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GDF3Q9NR23 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GDF3Q9NR23 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GDF3Q9NR23 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
GDF3Q9NR23 MIR4651-201ENST00000582622 73 ntBASIC20.88■□□□□ 0.93
GDF3Q9NR23 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
GDF3Q9NR23 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.88■□□□□ 0.93
GDF3Q9NR23 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
GDF3Q9NR23 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
GDF3Q9NR23 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
GDF3Q9NR23 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GDF3Q9NR23 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GDF3Q9NR23 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GDF3Q9NR23 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
GDF3Q9NR23 AC116050.2-201ENST00000612102 1779 ntBASIC20.87■□□□□ 0.93
GDF3Q9NR23 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
GDF3Q9NR23 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GDF3Q9NR23 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GDF3Q9NR23 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.87■□□□□ 0.93
GDF3Q9NR23 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
GDF3Q9NR23 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
GDF3Q9NR23 MIPEPP3-201ENST00000412105 444 ntBASIC20.87■□□□□ 0.93
GDF3Q9NR23 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GDF3Q9NR23 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.87■□□□□ 0.93
GDF3Q9NR23 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.87■□□□□ 0.93
GDF3Q9NR23 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.87■□□□□ 0.93
GDF3Q9NR23 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.87■□□□□ 0.93
GDF3Q9NR23 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
GDF3Q9NR23 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.87■□□□□ 0.93
GDF3Q9NR23 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms