Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMG20AQ9NP66 AC018470.1-201ENST00000624790 3129 ntBASIC17.99■□□□□ 0.47
HMG20AQ9NP66 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.99■□□□□ 0.47
HMG20AQ9NP66 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
HMG20AQ9NP66 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMG20AQ9NP66 TMEM179-206ENST00000616017 1645 ntBASIC17.99■□□□□ 0.47
HMG20AQ9NP66 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMG20AQ9NP66 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMG20AQ9NP66 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.99■□□□□ 0.47
HMG20AQ9NP66 AC099791.1-201ENST00000416440 715 ntBASIC17.99■□□□□ 0.47
HMG20AQ9NP66 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
HMG20AQ9NP66 AC027682.1-201ENST00000562846 899 ntBASIC17.99■□□□□ 0.47
HMG20AQ9NP66 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.99■□□□□ 0.47
HMG20AQ9NP66 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMG20AQ9NP66 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMG20AQ9NP66 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMG20AQ9NP66 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMG20AQ9NP66 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
HMG20AQ9NP66 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMG20AQ9NP66 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 AP006587.3-201ENST00000525742 1516 ntBASIC17.98■□□□□ 0.47
HMG20AQ9NP66 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 EDA-201ENST00000338901 1233 ntBASIC17.98■□□□□ 0.47
HMG20AQ9NP66 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.98■□□□□ 0.47
HMG20AQ9NP66 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMG20AQ9NP66 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 LINC01465-201ENST00000408887 1940 ntBASIC17.97■□□□□ 0.47
HMG20AQ9NP66 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMG20AQ9NP66 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMG20AQ9NP66 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMG20AQ9NP66 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
HMG20AQ9NP66 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HMG20AQ9NP66 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.96■□□□□ 0.47
HMG20AQ9NP66 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HMG20AQ9NP66 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.96■□□□□ 0.47
HMG20AQ9NP66 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMG20AQ9NP66 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
HMG20AQ9NP66 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMG20AQ9NP66 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.96■□□□□ 0.47
HMG20AQ9NP66 AP001330.3-201ENST00000520123 633 ntBASIC17.96■□□□□ 0.47
HMG20AQ9NP66 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.96■□□□□ 0.47
HMG20AQ9NP66 AC110285.6-201ENST00000617652 491 ntBASIC17.96■□□□□ 0.47
HMG20AQ9NP66 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HMG20AQ9NP66 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms