Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.5■□□□□ 0.39
COMMD4Q9H0A8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD4Q9H0A8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD4Q9H0A8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD4Q9H0A8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD4Q9H0A8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD4Q9H0A8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD4Q9H0A8 AC004854.2-201ENST00000608450 1441 ntBASIC17.49■□□□□ 0.39
COMMD4Q9H0A8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD4Q9H0A8 KRT19P1-201ENST00000405746 1186 ntBASIC17.49■□□□□ 0.39
COMMD4Q9H0A8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD4Q9H0A8 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD4Q9H0A8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD4Q9H0A8 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD4Q9H0A8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD4Q9H0A8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.49■□□□□ 0.39
COMMD4Q9H0A8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.49■□□□□ 0.39
COMMD4Q9H0A8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD4Q9H0A8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD4Q9H0A8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
COMMD4Q9H0A8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD4Q9H0A8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD4Q9H0A8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD4Q9H0A8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.48■□□□□ 0.39
COMMD4Q9H0A8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD4Q9H0A8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD4Q9H0A8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD4Q9H0A8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.48■□□□□ 0.39
COMMD4Q9H0A8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.48■□□□□ 0.39
COMMD4Q9H0A8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
COMMD4Q9H0A8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD4Q9H0A8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD4Q9H0A8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD4Q9H0A8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.48■□□□□ 0.39
COMMD4Q9H0A8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
COMMD4Q9H0A8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
COMMD4Q9H0A8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.48■□□□□ 0.39
COMMD4Q9H0A8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD4Q9H0A8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.48■□□□□ 0.39
COMMD4Q9H0A8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.48■□□□□ 0.39
COMMD4Q9H0A8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD4Q9H0A8 KRT18P14-201ENST00000534205 1250 ntBASIC17.48■□□□□ 0.39
COMMD4Q9H0A8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.48■□□□□ 0.39
COMMD4Q9H0A8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
COMMD4Q9H0A8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD4Q9H0A8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD4Q9H0A8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD4Q9H0A8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 AC009237.14-201ENST00000609975 1594 ntBASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD4Q9H0A8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD4Q9H0A8 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.46■□□□□ 0.39
COMMD4Q9H0A8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD4Q9H0A8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.46■□□□□ 0.39
COMMD4Q9H0A8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD4Q9H0A8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD4Q9H0A8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD4Q9H0A8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD4Q9H0A8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD4Q9H0A8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD4Q9H0A8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.46■□□□□ 0.39
COMMD4Q9H0A8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD4Q9H0A8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.46■□□□□ 0.39
COMMD4Q9H0A8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD4Q9H0A8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.46■□□□□ 0.39
COMMD4Q9H0A8 TNXA-203ENST00000507684 2038 ntBASIC17.46■□□□□ 0.39
COMMD4Q9H0A8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
COMMD4Q9H0A8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
COMMD4Q9H0A8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.46■□□□□ 0.39
COMMD4Q9H0A8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.46■□□□□ 0.39
COMMD4Q9H0A8 KRT16P6-202ENST00000425692 1426 ntBASIC17.46■□□□□ 0.39
COMMD4Q9H0A8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms