Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TUBA1CQ9BQE3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TUBA1CQ9BQE3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TUBA1CQ9BQE3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBA1CQ9BQE3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBA1CQ9BQE3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA1CQ9BQE3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA1CQ9BQE3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA1CQ9BQE3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TUBA1CQ9BQE3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.68■□□□□ 0.58
TUBA1CQ9BQE3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.68■□□□□ 0.58
TUBA1CQ9BQE3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA1CQ9BQE3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.68■□□□□ 0.58
TUBA1CQ9BQE3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA1CQ9BQE3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA1CQ9BQE3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TUBA1CQ9BQE3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA1CQ9BQE3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA1CQ9BQE3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.68■□□□□ 0.58
TUBA1CQ9BQE3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.68■□□□□ 0.58
TUBA1CQ9BQE3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.68■□□□□ 0.58
TUBA1CQ9BQE3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.68■□□□□ 0.58
TUBA1CQ9BQE3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.68■□□□□ 0.58
TUBA1CQ9BQE3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA1CQ9BQE3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TUBA1CQ9BQE3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA1CQ9BQE3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA1CQ9BQE3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TUBA1CQ9BQE3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA1CQ9BQE3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA1CQ9BQE3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TUBA1CQ9BQE3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBA1CQ9BQE3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.67■□□□□ 0.58
TUBA1CQ9BQE3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.67■□□□□ 0.58
TUBA1CQ9BQE3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBA1CQ9BQE3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBA1CQ9BQE3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
TUBA1CQ9BQE3 AC093787.1-201ENST00000450396 207 ntBASIC18.67■□□□□ 0.58
TUBA1CQ9BQE3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.67■□□□□ 0.58
TUBA1CQ9BQE3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.67■□□□□ 0.58
TUBA1CQ9BQE3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TUBA1CQ9BQE3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TUBA1CQ9BQE3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TUBA1CQ9BQE3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBA1CQ9BQE3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.67■□□□□ 0.58
TUBA1CQ9BQE3 AC093503.3-201ENST00000624917 2352 ntBASIC18.67■□□□□ 0.58
TUBA1CQ9BQE3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 MKRN4P-201ENST00000444706 1521 ntBASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 AL162412.1-201ENST00000567129 965 ntBASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA1CQ9BQE3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.65■□□□□ 0.58
TUBA1CQ9BQE3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBA1CQ9BQE3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.65■□□□□ 0.58
TUBA1CQ9BQE3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBA1CQ9BQE3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TUBA1CQ9BQE3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TUBA1CQ9BQE3 AC091799.1-201ENST00000422823 811 ntBASIC18.65■□□□□ 0.58
TUBA1CQ9BQE3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.65■□□□□ 0.58
TUBA1CQ9BQE3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.65■□□□□ 0.58
TUBA1CQ9BQE3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
TUBA1CQ9BQE3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.65■□□□□ 0.58
TUBA1CQ9BQE3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TUBA1CQ9BQE3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TUBA1CQ9BQE3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TUBA1CQ9BQE3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.65■□□□□ 0.58
TUBA1CQ9BQE3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBA1CQ9BQE3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
TUBA1CQ9BQE3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBA1CQ9BQE3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBA1CQ9BQE3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBA1CQ9BQE3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBA1CQ9BQE3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms