Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NR1H4Q96RI1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NR1H4Q96RI1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NR1H4Q96RI1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
NR1H4Q96RI1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.68■□□□□ 0.58
NR1H4Q96RI1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NR1H4Q96RI1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H4Q96RI1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H4Q96RI1 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H4Q96RI1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NR1H4Q96RI1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H4Q96RI1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H4Q96RI1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NR1H4Q96RI1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H4Q96RI1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.67■□□□□ 0.58
NR1H4Q96RI1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H4Q96RI1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.67■□□□□ 0.58
NR1H4Q96RI1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H4Q96RI1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
NR1H4Q96RI1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H4Q96RI1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.67■□□□□ 0.58
NR1H4Q96RI1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H4Q96RI1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NR1H4Q96RI1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H4Q96RI1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.67■□□□□ 0.58
NR1H4Q96RI1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.67■□□□□ 0.58
NR1H4Q96RI1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H4Q96RI1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NR1H4Q96RI1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
NR1H4Q96RI1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.66■□□□□ 0.58
NR1H4Q96RI1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NR1H4Q96RI1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NR1H4Q96RI1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.66■□□□□ 0.58
NR1H4Q96RI1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NR1H4Q96RI1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.66■□□□□ 0.58
NR1H4Q96RI1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NR1H4Q96RI1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NR1H4Q96RI1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
NR1H4Q96RI1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
NR1H4Q96RI1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NR1H4Q96RI1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
NR1H4Q96RI1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.66■□□□□ 0.58
NR1H4Q96RI1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
NR1H4Q96RI1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.65■□□□□ 0.58
NR1H4Q96RI1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H4Q96RI1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.65■□□□□ 0.58
NR1H4Q96RI1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.65■□□□□ 0.58
NR1H4Q96RI1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
NR1H4Q96RI1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H4Q96RI1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NR1H4Q96RI1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
NR1H4Q96RI1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.65■□□□□ 0.58
NR1H4Q96RI1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H4Q96RI1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H4Q96RI1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.65■□□□□ 0.58
NR1H4Q96RI1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.65■□□□□ 0.58
NR1H4Q96RI1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H4Q96RI1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NR1H4Q96RI1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H4Q96RI1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.65■□□□□ 0.58
NR1H4Q96RI1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H4Q96RI1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NR1H4Q96RI1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H4Q96RI1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.65■□□□□ 0.58
NR1H4Q96RI1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H4Q96RI1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
NR1H4Q96RI1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NR1H4Q96RI1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NR1H4Q96RI1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
NR1H4Q96RI1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
NR1H4Q96RI1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
NR1H4Q96RI1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR1H4Q96RI1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR1H4Q96RI1 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.64■□□□□ 0.57
NR1H4Q96RI1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NR1H4Q96RI1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR1H4Q96RI1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR1H4Q96RI1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
NR1H4Q96RI1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR1H4Q96RI1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.64■□□□□ 0.57
NR1H4Q96RI1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.64■□□□□ 0.57
NR1H4Q96RI1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR1H4Q96RI1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR1H4Q96RI1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.64■□□□□ 0.57
NR1H4Q96RI1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR1H4Q96RI1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR1H4Q96RI1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NR1H4Q96RI1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NR1H4Q96RI1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR1H4Q96RI1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR1H4Q96RI1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR1H4Q96RI1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.63■□□□□ 0.57
NR1H4Q96RI1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR1H4Q96RI1 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR1H4Q96RI1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
NR1H4Q96RI1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR1H4Q96RI1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NR1H4Q96RI1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR1H4Q96RI1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.63■□□□□ 0.57
NR1H4Q96RI1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms