Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.58■□□□□ 0.4
APH1AQ96BI3 AC233263.1-201ENST00000578059 224 ntBASIC17.58■□□□□ 0.4
APH1AQ96BI3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.58■□□□□ 0.4
APH1AQ96BI3 AL121829.2-201ENST00000620908 328 ntBASIC17.58■□□□□ 0.4
APH1AQ96BI3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
APH1AQ96BI3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
APH1AQ96BI3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.58■□□□□ 0.4
APH1AQ96BI3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
APH1AQ96BI3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.57■□□□□ 0.4
APH1AQ96BI3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.57■□□□□ 0.4
APH1AQ96BI3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.57■□□□□ 0.4
APH1AQ96BI3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.57■□□□□ 0.4
APH1AQ96BI3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.57■□□□□ 0.4
APH1AQ96BI3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
APH1AQ96BI3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
APH1AQ96BI3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
APH1AQ96BI3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
APH1AQ96BI3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.57■□□□□ 0.4
APH1AQ96BI3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.57■□□□□ 0.4
APH1AQ96BI3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.57■□□□□ 0.4
APH1AQ96BI3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
APH1AQ96BI3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.57■□□□□ 0.4
APH1AQ96BI3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APH1AQ96BI3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
APH1AQ96BI3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.57■□□□□ 0.4
APH1AQ96BI3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APH1AQ96BI3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
APH1AQ96BI3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.57■□□□□ 0.4
APH1AQ96BI3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
APH1AQ96BI3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APH1AQ96BI3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
APH1AQ96BI3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
APH1AQ96BI3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
APH1AQ96BI3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
APH1AQ96BI3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
APH1AQ96BI3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APH1AQ96BI3 SLC25A24-204ENST00000569674 2357 ntBASIC17.57■□□□□ 0.4
APH1AQ96BI3 LINC01521-201ENST00000504184 1943 ntBASIC17.57■□□□□ 0.4
APH1AQ96BI3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
APH1AQ96BI3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.57■□□□□ 0.4
APH1AQ96BI3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
APH1AQ96BI3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APH1AQ96BI3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
APH1AQ96BI3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
APH1AQ96BI3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APH1AQ96BI3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APH1AQ96BI3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
APH1AQ96BI3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APH1AQ96BI3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APH1AQ96BI3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.56■□□□□ 0.4
APH1AQ96BI3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
APH1AQ96BI3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.56■□□□□ 0.4
APH1AQ96BI3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.56■□□□□ 0.4
APH1AQ96BI3 RN7SL471P-201ENST00000580476 299 ntBASIC17.56■□□□□ 0.4
APH1AQ96BI3 MTDHP1-201ENST00000605323 784 ntBASIC17.56■□□□□ 0.4
APH1AQ96BI3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
APH1AQ96BI3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.56■□□□□ 0.4
APH1AQ96BI3 PHGDH-210ENST00000641115 1638 ntBASIC17.56■□□□□ 0.4
APH1AQ96BI3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.56■□□□□ 0.4
APH1AQ96BI3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
APH1AQ96BI3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.56■□□□□ 0.4
APH1AQ96BI3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APH1AQ96BI3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APH1AQ96BI3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
APH1AQ96BI3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APH1AQ96BI3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
APH1AQ96BI3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.56■□□□□ 0.4
APH1AQ96BI3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.56■□□□□ 0.4
APH1AQ96BI3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
APH1AQ96BI3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
APH1AQ96BI3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
APH1AQ96BI3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APH1AQ96BI3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APH1AQ96BI3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
APH1AQ96BI3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
APH1AQ96BI3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APH1AQ96BI3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
APH1AQ96BI3 AC239809.2-201ENST00000415381 517 ntBASIC17.55■□□□□ 0.4
APH1AQ96BI3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.55■□□□□ 0.4
APH1AQ96BI3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.55■□□□□ 0.4
APH1AQ96BI3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
APH1AQ96BI3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
APH1AQ96BI3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APH1AQ96BI3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.55■□□□□ 0.4
APH1AQ96BI3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APH1AQ96BI3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APH1AQ96BI3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APH1AQ96BI3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.55■□□□□ 0.4
APH1AQ96BI3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.55■□□□□ 0.4
APH1AQ96BI3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APH1AQ96BI3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
APH1AQ96BI3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
APH1AQ96BI3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APH1AQ96BI3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.55■□□□□ 0.4
APH1AQ96BI3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.55■□□□□ 0.4
APH1AQ96BI3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
APH1AQ96BI3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
APH1AQ96BI3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
APH1AQ96BI3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.54■□□□□ 0.4
APH1AQ96BI3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms