Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CASKIN1Q8WXD9 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CASKIN1Q8WXD9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
CASKIN1Q8WXD9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC31.02■■■□□ 2.56
CASKIN1Q8WXD9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC31.02■■■□□ 2.56
CASKIN1Q8WXD9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC31.02■■■□□ 2.56
CASKIN1Q8WXD9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
CASKIN1Q8WXD9 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CASKIN1Q8WXD9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
CASKIN1Q8WXD9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC31.01■■■□□ 2.56
CASKIN1Q8WXD9 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC31.01■■■□□ 2.55
CASKIN1Q8WXD9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
CASKIN1Q8WXD9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CASKIN1Q8WXD9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC31.01■■■□□ 2.55
CASKIN1Q8WXD9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CASKIN1Q8WXD9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC31■■■□□ 2.55
CASKIN1Q8WXD9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
CASKIN1Q8WXD9 AC113347.1-201ENST00000413321 391 ntBASIC31■■■□□ 2.55
CASKIN1Q8WXD9 DUT-205ENST00000558813 769 ntTSL 2 BASIC31■■■□□ 2.55
CASKIN1Q8WXD9 AP005242.2-201ENST00000580065 1175 ntBASIC31■■■□□ 2.55
CASKIN1Q8WXD9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC31■■■□□ 2.55
CASKIN1Q8WXD9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CASKIN1Q8WXD9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
CASKIN1Q8WXD9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
CASKIN1Q8WXD9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CASKIN1Q8WXD9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CASKIN1Q8WXD9 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC30.99■■■□□ 2.55
CASKIN1Q8WXD9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CASKIN1Q8WXD9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CASKIN1Q8WXD9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
CASKIN1Q8WXD9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC30.99■■■□□ 2.55
CASKIN1Q8WXD9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC30.99■■■□□ 2.55
CASKIN1Q8WXD9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC30.99■■■□□ 2.55
CASKIN1Q8WXD9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC30.99■■■□□ 2.55
CASKIN1Q8WXD9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
CASKIN1Q8WXD9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC30.99■■■□□ 2.55
CASKIN1Q8WXD9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
CASKIN1Q8WXD9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
CASKIN1Q8WXD9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CASKIN1Q8WXD9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
CASKIN1Q8WXD9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC30.98■■■□□ 2.55
CASKIN1Q8WXD9 TMPOP1-202ENST00000424642 1267 ntBASIC30.98■■■□□ 2.55
CASKIN1Q8WXD9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CASKIN1Q8WXD9 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
CASKIN1Q8WXD9 SMG8-203ENST00000578922 2178 ntBASIC30.98■■■□□ 2.55
CASKIN1Q8WXD9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CASKIN1Q8WXD9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CASKIN1Q8WXD9 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
CASKIN1Q8WXD9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC30.98■■■□□ 2.55
CASKIN1Q8WXD9 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
CASKIN1Q8WXD9 TUBB8P6-201ENST00000436895 1288 ntBASIC30.98■■■□□ 2.55
CASKIN1Q8WXD9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CASKIN1Q8WXD9 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC30.98■■■□□ 2.55
CASKIN1Q8WXD9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CASKIN1Q8WXD9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CASKIN1Q8WXD9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC30.97■■■□□ 2.55
CASKIN1Q8WXD9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CASKIN1Q8WXD9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
CASKIN1Q8WXD9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC30.97■■■□□ 2.55
CASKIN1Q8WXD9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC30.97■■■□□ 2.55
CASKIN1Q8WXD9 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CASKIN1Q8WXD9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC30.97■■■□□ 2.55
CASKIN1Q8WXD9 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC30.97■■■□□ 2.55
CASKIN1Q8WXD9 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC30.97■■■□□ 2.55
CASKIN1Q8WXD9 HLA-A-209ENST00000638375 975 ntBASIC30.97■■■□□ 2.55
CASKIN1Q8WXD9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC30.97■■■□□ 2.55
CASKIN1Q8WXD9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CASKIN1Q8WXD9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
CASKIN1Q8WXD9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
CASKIN1Q8WXD9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
CASKIN1Q8WXD9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CASKIN1Q8WXD9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CASKIN1Q8WXD9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CASKIN1Q8WXD9 FSCN1P1-201ENST00000568912 1481 ntBASIC30.96■■■□□ 2.55
CASKIN1Q8WXD9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC30.96■■■□□ 2.55
CASKIN1Q8WXD9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
CASKIN1Q8WXD9 AC011506.1-201ENST00000474329 610 ntBASIC30.96■■■□□ 2.55
CASKIN1Q8WXD9 AC092865.7-201ENST00000641832 219 ntBASIC30.96■■■□□ 2.55
CASKIN1Q8WXD9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CASKIN1Q8WXD9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC30.96■■■□□ 2.55
CASKIN1Q8WXD9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
CASKIN1Q8WXD9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
CASKIN1Q8WXD9 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC30.95■■■□□ 2.54
CASKIN1Q8WXD9 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
CASKIN1Q8WXD9 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
CASKIN1Q8WXD9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC30.94■■■□□ 2.54
CASKIN1Q8WXD9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
CASKIN1Q8WXD9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC30.94■■■□□ 2.54
CASKIN1Q8WXD9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CASKIN1Q8WXD9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
CASKIN1Q8WXD9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CASKIN1Q8WXD9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC30.94■■■□□ 2.54
CASKIN1Q8WXD9 CRAT-202ENST00000393384 973 ntTSL 2 BASIC30.94■■■□□ 2.54
CASKIN1Q8WXD9 NAPSB-206ENST00000562112 1266 ntBASIC30.94■■■□□ 2.54
CASKIN1Q8WXD9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC30.94■■■□□ 2.54
CASKIN1Q8WXD9 RBM42-202ENST00000586618 771 ntTSL 3 BASIC30.94■■■□□ 2.54
CASKIN1Q8WXD9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC30.94■■■□□ 2.54
CASKIN1Q8WXD9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CASKIN1Q8WXD9 AC073508.3-201ENST00000619697 1419 ntBASIC30.93■■■□□ 2.54
CASKIN1Q8WXD9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC30.93■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms