Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC107Q8WV48 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC107Q8WV48 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC107Q8WV48 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC107Q8WV48 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC107Q8WV48 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC107Q8WV48 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC107Q8WV48 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC107Q8WV48 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC107Q8WV48 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC107Q8WV48 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC107Q8WV48 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC107Q8WV48 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC107Q8WV48 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC107Q8WV48 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC107Q8WV48 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC107Q8WV48 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC107Q8WV48 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC107Q8WV48 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC107Q8WV48 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC107Q8WV48 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC107Q8WV48 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC107Q8WV48 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC107Q8WV48 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC107Q8WV48 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC107Q8WV48 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC107Q8WV48 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CCDC107Q8WV48 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC107Q8WV48 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCDC107Q8WV48 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
CCDC107Q8WV48 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC107Q8WV48 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC107Q8WV48 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC107Q8WV48 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC107Q8WV48 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCDC107Q8WV48 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 AC116050.2-201ENST00000612102 1779 ntBASIC17.1■□□□□ 0.33
CCDC107Q8WV48 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CCDC107Q8WV48 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC107Q8WV48 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.08■□□□□ 0.33
CCDC107Q8WV48 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC107Q8WV48 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC107Q8WV48 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC107Q8WV48 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
CCDC107Q8WV48 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms