Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PCDH19Q8TAB3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH19Q8TAB3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH19Q8TAB3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PCDH19Q8TAB3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH19Q8TAB3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH19Q8TAB3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDH19Q8TAB3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.49■□□□□ 0.87
PCDH19Q8TAB3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDH19Q8TAB3 AC005829.2-201ENST00000571422 1056 ntBASIC20.49■□□□□ 0.87
PCDH19Q8TAB3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDH19Q8TAB3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH19Q8TAB3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH19Q8TAB3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH19Q8TAB3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
PCDH19Q8TAB3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH19Q8TAB3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH19Q8TAB3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH19Q8TAB3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDH19Q8TAB3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH19Q8TAB3 TREX1-205ENST00000625293 1783 ntBASIC20.49■□□□□ 0.87
PCDH19Q8TAB3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 AP001271.2-201ENST00000624018 1556 ntBASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 AC097658.1-201ENST00000475555 843 ntBASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 MIR4651-201ENST00000582622 73 ntBASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 AC083880.1-201ENST00000608266 535 ntBASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PCDH19Q8TAB3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDH19Q8TAB3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH19Q8TAB3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH19Q8TAB3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH19Q8TAB3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH19Q8TAB3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH19Q8TAB3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDH19Q8TAB3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PCDH19Q8TAB3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH19Q8TAB3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDH19Q8TAB3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDH19Q8TAB3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH19Q8TAB3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDH19Q8TAB3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.47■□□□□ 0.87
PCDH19Q8TAB3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PCDH19Q8TAB3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH19Q8TAB3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH19Q8TAB3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDH19Q8TAB3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PCDH19Q8TAB3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH19Q8TAB3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDH19Q8TAB3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH19Q8TAB3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDH19Q8TAB3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH19Q8TAB3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH19Q8TAB3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH19Q8TAB3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH19Q8TAB3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH19Q8TAB3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.46■□□□□ 0.87
PCDH19Q8TAB3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDH19Q8TAB3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.46■□□□□ 0.87
PCDH19Q8TAB3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDH19Q8TAB3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDH19Q8TAB3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH19Q8TAB3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH19Q8TAB3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDH19Q8TAB3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH19Q8TAB3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH19Q8TAB3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDH19Q8TAB3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH19Q8TAB3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PCDH19Q8TAB3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH19Q8TAB3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH19Q8TAB3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PCDH19Q8TAB3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH19Q8TAB3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms