Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
SPTSSBQ8NFR3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 FEM1AP1-201ENST00000431297 1995 ntBASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 STK40-201ENST00000359297 4837 ntTSL 2 BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 AC025884.2-201ENST00000553429 711 ntBASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 AC021231.2-201ENST00000594613 730 ntBASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SPTSSBQ8NFR3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
SPTSSBQ8NFR3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SPTSSBQ8NFR3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
SPTSSBQ8NFR3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC10.9□□□□□ -0.67
SPTSSBQ8NFR3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SPTSSBQ8NFR3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SPTSSBQ8NFR3 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.67
SPTSSBQ8NFR3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SPTSSBQ8NFR3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 MST1L-201ENST00000442552 2185 ntBASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 FEM1AP4-201ENST00000443167 1987 ntBASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 AC104564.3-201ENST00000582367 638 ntBASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
SPTSSBQ8NFR3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SPTSSBQ8NFR3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms