Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CFAP43Q8NDM7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
CFAP43Q8NDM7 KRT8P20-201ENST00000423953 1409 ntBASIC31.23■■■□□ 2.59
CFAP43Q8NDM7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CFAP43Q8NDM7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CFAP43Q8NDM7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CFAP43Q8NDM7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC31.22■■■□□ 2.59
CFAP43Q8NDM7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CFAP43Q8NDM7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC31.22■■■□□ 2.59
CFAP43Q8NDM7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CFAP43Q8NDM7 AC007225.1-201ENST00000566331 1836 ntBASIC31.22■■■□□ 2.59
CFAP43Q8NDM7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC31.22■■■□□ 2.59
CFAP43Q8NDM7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
CFAP43Q8NDM7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CFAP43Q8NDM7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CFAP43Q8NDM7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC31.22■■■□□ 2.59
CFAP43Q8NDM7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC31.22■■■□□ 2.59
CFAP43Q8NDM7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC31.22■■■□□ 2.59
CFAP43Q8NDM7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CFAP43Q8NDM7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CFAP43Q8NDM7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
CFAP43Q8NDM7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CFAP43Q8NDM7 FP700111.2-201ENST00000619190 1892 ntBASIC31.21■■■□□ 2.59
CFAP43Q8NDM7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC31.21■■■□□ 2.59
CFAP43Q8NDM7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC31.21■■■□□ 2.59
CFAP43Q8NDM7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC31.21■■■□□ 2.59
CFAP43Q8NDM7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CFAP43Q8NDM7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC31.21■■■□□ 2.59
CFAP43Q8NDM7 DUSP5P1-201ENST00000441325 1139 ntBASIC31.21■■■□□ 2.59
CFAP43Q8NDM7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CFAP43Q8NDM7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
CFAP43Q8NDM7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC31.21■■■□□ 2.59
CFAP43Q8NDM7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CFAP43Q8NDM7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC31.2■■■□□ 2.59
CFAP43Q8NDM7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.59
CFAP43Q8NDM7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CFAP43Q8NDM7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC31.2■■■□□ 2.59
CFAP43Q8NDM7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC31.2■■■□□ 2.59
CFAP43Q8NDM7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CFAP43Q8NDM7 AC026271.3-201ENST00000571884 352 ntBASIC31.2■■■□□ 2.59
CFAP43Q8NDM7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
CFAP43Q8NDM7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.58
CFAP43Q8NDM7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CFAP43Q8NDM7 DPP3P2-201ENST00000416030 1696 ntBASIC31.2■■■□□ 2.58
CFAP43Q8NDM7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CFAP43Q8NDM7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
CFAP43Q8NDM7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC31.19■■■□□ 2.58
CFAP43Q8NDM7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
CFAP43Q8NDM7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CFAP43Q8NDM7 AC091076.1-201ENST00000610741 619 ntBASIC31.19■■■□□ 2.58
CFAP43Q8NDM7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
CFAP43Q8NDM7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CFAP43Q8NDM7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CFAP43Q8NDM7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CFAP43Q8NDM7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC31.19■■■□□ 2.58
CFAP43Q8NDM7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
CFAP43Q8NDM7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC31.19■■■□□ 2.58
CFAP43Q8NDM7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC31.19■■■□□ 2.58
CFAP43Q8NDM7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
CFAP43Q8NDM7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CFAP43Q8NDM7 DGCR10-201ENST00000609839 495 ntBASIC31.19■■■□□ 2.58
CFAP43Q8NDM7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
CFAP43Q8NDM7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
CFAP43Q8NDM7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CFAP43Q8NDM7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CFAP43Q8NDM7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC31.18■■■□□ 2.58
CFAP43Q8NDM7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC31.18■■■□□ 2.58
CFAP43Q8NDM7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CFAP43Q8NDM7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC31.18■■■□□ 2.58
CFAP43Q8NDM7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
CFAP43Q8NDM7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC31.18■■■□□ 2.58
CFAP43Q8NDM7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC31.18■■■□□ 2.58
CFAP43Q8NDM7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC31.18■■■□□ 2.58
CFAP43Q8NDM7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC31.18■■■□□ 2.58
CFAP43Q8NDM7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC31.18■■■□□ 2.58
CFAP43Q8NDM7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC31.18■■■□□ 2.58
CFAP43Q8NDM7 PNN-205ENST00000556530 601 ntTSL 2 BASIC31.18■■■□□ 2.58
CFAP43Q8NDM7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CFAP43Q8NDM7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC31.18■■■□□ 2.58
CFAP43Q8NDM7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CFAP43Q8NDM7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC31.17■■■□□ 2.58
CFAP43Q8NDM7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CFAP43Q8NDM7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CFAP43Q8NDM7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC31.17■■■□□ 2.58
CFAP43Q8NDM7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC31.17■■■□□ 2.58
CFAP43Q8NDM7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC31.17■■■□□ 2.58
CFAP43Q8NDM7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC31.17■■■□□ 2.58
CFAP43Q8NDM7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CFAP43Q8NDM7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
CFAP43Q8NDM7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CFAP43Q8NDM7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CFAP43Q8NDM7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC31.16■■■□□ 2.58
CFAP43Q8NDM7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CFAP43Q8NDM7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC31.16■■■□□ 2.58
CFAP43Q8NDM7 AK4P3-201ENST00000418260 669 ntBASIC31.16■■■□□ 2.58
CFAP43Q8NDM7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
CFAP43Q8NDM7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC31.16■■■□□ 2.58
CFAP43Q8NDM7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC31.16■■■□□ 2.58
CFAP43Q8NDM7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CFAP43Q8NDM7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms