Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 FAAHP1-202ENST00000446499 1238 ntBASIC16.67■□□□□ 0.26
CCDC168Q8NDH2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC168Q8NDH2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC168Q8NDH2 AC140113.3-201ENST00000605663 199 ntBASIC16.67■□□□□ 0.26
CCDC168Q8NDH2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC168Q8NDH2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC168Q8NDH2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC168Q8NDH2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC168Q8NDH2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC168Q8NDH2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CCDC168Q8NDH2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC168Q8NDH2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC168Q8NDH2 RCC2P6-201ENST00000526625 1557 ntBASIC16.66■□□□□ 0.26
CCDC168Q8NDH2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC168Q8NDH2 UNC93B7-201ENST00000509439 705 ntBASIC16.66■□□□□ 0.26
CCDC168Q8NDH2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC168Q8NDH2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC168Q8NDH2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC168Q8NDH2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC168Q8NDH2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC168Q8NDH2 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC168Q8NDH2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC168Q8NDH2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC168Q8NDH2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC168Q8NDH2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CCDC168Q8NDH2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC168Q8NDH2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC168Q8NDH2 AP000692.2-201ENST00000608391 879 ntBASIC16.65■□□□□ 0.26
CCDC168Q8NDH2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC168Q8NDH2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC168Q8NDH2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC168Q8NDH2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCDC168Q8NDH2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC168Q8NDH2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC168Q8NDH2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC168Q8NDH2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC168Q8NDH2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC168Q8NDH2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CCDC168Q8NDH2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC168Q8NDH2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCDC168Q8NDH2 AL023973.1-201ENST00000624619 620 ntBASIC16.65■□□□□ 0.26
CCDC168Q8NDH2 AL031432.5-201ENST00000641059 760 ntBASIC16.65■□□□□ 0.26
CCDC168Q8NDH2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC168Q8NDH2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC168Q8NDH2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC168Q8NDH2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CCDC168Q8NDH2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC168Q8NDH2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
CCDC168Q8NDH2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC168Q8NDH2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC168Q8NDH2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCDC168Q8NDH2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.64■□□□□ 0.26
CCDC168Q8NDH2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.64■□□□□ 0.26
CCDC168Q8NDH2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.64■□□□□ 0.26
CCDC168Q8NDH2 SLC25A1P2-201ENST00000430693 912 ntBASIC16.64■□□□□ 0.26
CCDC168Q8NDH2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.64■□□□□ 0.26
CCDC168Q8NDH2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.26
CCDC168Q8NDH2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CCDC168Q8NDH2 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC168Q8NDH2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC168Q8NDH2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CCDC168Q8NDH2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC168Q8NDH2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC168Q8NDH2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.64■□□□□ 0.25
CCDC168Q8NDH2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC168Q8NDH2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC168Q8NDH2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC168Q8NDH2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC168Q8NDH2 AC010653.2-201ENST00000623505 997 ntBASIC16.64■□□□□ 0.25
CCDC168Q8NDH2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC168Q8NDH2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC168Q8NDH2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CCDC168Q8NDH2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC168Q8NDH2 AL512604.3-201ENST00000569583 964 ntBASIC16.63■□□□□ 0.25
CCDC168Q8NDH2 MIR3180-1-201ENST00000580374 94 ntBASIC16.63■□□□□ 0.25
CCDC168Q8NDH2 MIR3180-3-201ENST00000584616 94 ntBASIC16.63■□□□□ 0.25
CCDC168Q8NDH2 AC141257.4-201ENST00000634557 245 ntBASIC16.63■□□□□ 0.25
CCDC168Q8NDH2 AC136944.6-201ENST00000634818 245 ntBASIC16.63■□□□□ 0.25
CCDC168Q8NDH2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CCDC168Q8NDH2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CCDC168Q8NDH2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC168Q8NDH2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC168Q8NDH2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC168Q8NDH2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC168Q8NDH2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC168Q8NDH2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.63■□□□□ 0.25
CCDC168Q8NDH2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC168Q8NDH2 AL441883.1-201ENST00000566170 1045 ntBASIC16.63■□□□□ 0.25
CCDC168Q8NDH2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC168Q8NDH2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC168Q8NDH2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC168Q8NDH2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC168Q8NDH2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC168Q8NDH2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC168Q8NDH2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
CCDC168Q8NDH2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC168Q8NDH2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC168Q8NDH2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC168Q8NDH2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC168Q8NDH2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms