Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATPAF2Q8N5M1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.36■□□□□ 0.85
ATPAF2Q8N5M1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
ATPAF2Q8N5M1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.36■□□□□ 0.85
ATPAF2Q8N5M1 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.36■□□□□ 0.85
ATPAF2Q8N5M1 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.36■□□□□ 0.85
ATPAF2Q8N5M1 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.36■□□□□ 0.85
ATPAF2Q8N5M1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.36■□□□□ 0.85
ATPAF2Q8N5M1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
ATPAF2Q8N5M1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
ATPAF2Q8N5M1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
ATPAF2Q8N5M1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATPAF2Q8N5M1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATPAF2Q8N5M1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATPAF2Q8N5M1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATPAF2Q8N5M1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATPAF2Q8N5M1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATPAF2Q8N5M1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATPAF2Q8N5M1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATPAF2Q8N5M1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ATPAF2Q8N5M1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATPAF2Q8N5M1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.35■□□□□ 0.85
ATPAF2Q8N5M1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.35■□□□□ 0.85
ATPAF2Q8N5M1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.35■□□□□ 0.85
ATPAF2Q8N5M1 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.35■□□□□ 0.85
ATPAF2Q8N5M1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATPAF2Q8N5M1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ATPAF2Q8N5M1 AIRN-201ENST00000601203 4374 ntBASIC20.35■□□□□ 0.85
ATPAF2Q8N5M1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATPAF2Q8N5M1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATPAF2Q8N5M1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.35■□□□□ 0.85
ATPAF2Q8N5M1 PHGDH-210ENST00000641115 1638 ntBASIC20.35■□□□□ 0.85
ATPAF2Q8N5M1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ATPAF2Q8N5M1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATPAF2Q8N5M1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.34■□□□□ 0.85
ATPAF2Q8N5M1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.34■□□□□ 0.85
ATPAF2Q8N5M1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATPAF2Q8N5M1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATPAF2Q8N5M1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.34■□□□□ 0.85
ATPAF2Q8N5M1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATPAF2Q8N5M1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATPAF2Q8N5M1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
ATPAF2Q8N5M1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATPAF2Q8N5M1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.34■□□□□ 0.85
ATPAF2Q8N5M1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.34■□□□□ 0.85
ATPAF2Q8N5M1 RNA5SP413-201ENST00000516373 109 ntBASIC20.34■□□□□ 0.85
ATPAF2Q8N5M1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATPAF2Q8N5M1 SOX15-203ENST00000570788 1093 ntBASIC20.34■□□□□ 0.85
ATPAF2Q8N5M1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
ATPAF2Q8N5M1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.34■□□□□ 0.85
ATPAF2Q8N5M1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATPAF2Q8N5M1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATPAF2Q8N5M1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATPAF2Q8N5M1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATPAF2Q8N5M1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ATPAF2Q8N5M1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATPAF2Q8N5M1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.34■□□□□ 0.85
ATPAF2Q8N5M1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATPAF2Q8N5M1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATPAF2Q8N5M1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATPAF2Q8N5M1 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.33■□□□□ 0.85
ATPAF2Q8N5M1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATPAF2Q8N5M1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATPAF2Q8N5M1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.33■□□□□ 0.85
ATPAF2Q8N5M1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.33■□□□□ 0.85
ATPAF2Q8N5M1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.33■□□□□ 0.85
ATPAF2Q8N5M1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATPAF2Q8N5M1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.33■□□□□ 0.84
ATPAF2Q8N5M1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATPAF2Q8N5M1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATPAF2Q8N5M1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
ATPAF2Q8N5M1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATPAF2Q8N5M1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
ATPAF2Q8N5M1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATPAF2Q8N5M1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.32■□□□□ 0.84
ATPAF2Q8N5M1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATPAF2Q8N5M1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATPAF2Q8N5M1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
ATPAF2Q8N5M1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATPAF2Q8N5M1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATPAF2Q8N5M1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATPAF2Q8N5M1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.32■□□□□ 0.84
ATPAF2Q8N5M1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATPAF2Q8N5M1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATPAF2Q8N5M1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.32■□□□□ 0.84
ATPAF2Q8N5M1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATPAF2Q8N5M1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.32■□□□□ 0.84
ATPAF2Q8N5M1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.32■□□□□ 0.84
ATPAF2Q8N5M1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.32■□□□□ 0.84
ATPAF2Q8N5M1 KRT18P6-201ENST00000555540 1265 ntBASIC20.32■□□□□ 0.84
ATPAF2Q8N5M1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.32■□□□□ 0.84
ATPAF2Q8N5M1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.32■□□□□ 0.84
ATPAF2Q8N5M1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.32■□□□□ 0.84
ATPAF2Q8N5M1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.32■□□□□ 0.84
ATPAF2Q8N5M1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATPAF2Q8N5M1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.32■□□□□ 0.84
ATPAF2Q8N5M1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.32■□□□□ 0.84
ATPAF2Q8N5M1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATPAF2Q8N5M1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.31■□□□□ 0.84
ATPAF2Q8N5M1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms