Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CHPFQ8IZ52 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHPFQ8IZ52 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHPFQ8IZ52 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
CHPFQ8IZ52 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.23■□□□□ 0.83
CHPFQ8IZ52 AC073130.3-201ENST00000624389 2278 ntBASIC20.23■□□□□ 0.83
CHPFQ8IZ52 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CHPFQ8IZ52 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CHPFQ8IZ52 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHPFQ8IZ52 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHPFQ8IZ52 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHPFQ8IZ52 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHPFQ8IZ52 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.23■□□□□ 0.83
CHPFQ8IZ52 AC087499.1-201ENST00000418141 1075 ntBASIC20.23■□□□□ 0.83
CHPFQ8IZ52 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CHPFQ8IZ52 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.23■□□□□ 0.83
CHPFQ8IZ52 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.23■□□□□ 0.83
CHPFQ8IZ52 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.23■□□□□ 0.83
CHPFQ8IZ52 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.23■□□□□ 0.83
CHPFQ8IZ52 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.23■□□□□ 0.83
CHPFQ8IZ52 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHPFQ8IZ52 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHPFQ8IZ52 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.23■□□□□ 0.83
CHPFQ8IZ52 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHPFQ8IZ52 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
CHPFQ8IZ52 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.22■□□□□ 0.83
CHPFQ8IZ52 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHPFQ8IZ52 KRT8P17-201ENST00000453110 1448 ntBASIC20.22■□□□□ 0.83
CHPFQ8IZ52 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHPFQ8IZ52 FAM197Y1-201ENST00000421178 764 ntBASIC20.22■□□□□ 0.83
CHPFQ8IZ52 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
CHPFQ8IZ52 FAM210CP-201ENST00000445714 574 ntBASIC20.22■□□□□ 0.83
CHPFQ8IZ52 AP002982.1-201ENST00000492365 877 ntBASIC20.22■□□□□ 0.83
CHPFQ8IZ52 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CHPFQ8IZ52 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.22■□□□□ 0.83
CHPFQ8IZ52 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.22■□□□□ 0.83
CHPFQ8IZ52 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.22■□□□□ 0.83
CHPFQ8IZ52 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.22■□□□□ 0.83
CHPFQ8IZ52 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.22■□□□□ 0.83
CHPFQ8IZ52 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHPFQ8IZ52 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CHPFQ8IZ52 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHPFQ8IZ52 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHPFQ8IZ52 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHPFQ8IZ52 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHPFQ8IZ52 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHPFQ8IZ52 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHPFQ8IZ52 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.21■□□□□ 0.83
CHPFQ8IZ52 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHPFQ8IZ52 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.21■□□□□ 0.83
CHPFQ8IZ52 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
CHPFQ8IZ52 AC073195.1-201ENST00000607241 877 ntBASIC20.21■□□□□ 0.83
CHPFQ8IZ52 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHPFQ8IZ52 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHPFQ8IZ52 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CHPFQ8IZ52 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CHPFQ8IZ52 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHPFQ8IZ52 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHPFQ8IZ52 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.21■□□□□ 0.83
CHPFQ8IZ52 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHPFQ8IZ52 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHPFQ8IZ52 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHPFQ8IZ52 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHPFQ8IZ52 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.2■□□□□ 0.82
CHPFQ8IZ52 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHPFQ8IZ52 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHPFQ8IZ52 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.2■□□□□ 0.82
CHPFQ8IZ52 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHPFQ8IZ52 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHPFQ8IZ52 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHPFQ8IZ52 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.2■□□□□ 0.82
CHPFQ8IZ52 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHPFQ8IZ52 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.2■□□□□ 0.82
CHPFQ8IZ52 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CHPFQ8IZ52 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.2■□□□□ 0.82
CHPFQ8IZ52 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.2■□□□□ 0.82
CHPFQ8IZ52 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CHPFQ8IZ52 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CHPFQ8IZ52 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHPFQ8IZ52 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CHPFQ8IZ52 AC006128.1-201ENST00000624704 1661 ntBASIC20.19■□□□□ 0.82
CHPFQ8IZ52 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHPFQ8IZ52 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHPFQ8IZ52 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.19■□□□□ 0.82
CHPFQ8IZ52 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHPFQ8IZ52 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.19■□□□□ 0.82
CHPFQ8IZ52 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.19■□□□□ 0.82
CHPFQ8IZ52 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.19■□□□□ 0.82
CHPFQ8IZ52 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHPFQ8IZ52 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHPFQ8IZ52 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CHPFQ8IZ52 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHPFQ8IZ52 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHPFQ8IZ52 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHPFQ8IZ52 KRT18P21-201ENST00000515767 1272 ntBASIC20.19■□□□□ 0.82
CHPFQ8IZ52 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CHPFQ8IZ52 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.19■□□□□ 0.82
CHPFQ8IZ52 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.19■□□□□ 0.82
CHPFQ8IZ52 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.19■□□□□ 0.82
CHPFQ8IZ52 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms