Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.85■□□□□ 0.29
CSMD2Q7Z408 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.85■□□□□ 0.29
CSMD2Q7Z408 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSMD2Q7Z408 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.85■□□□□ 0.29
CSMD2Q7Z408 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.85■□□□□ 0.29
CSMD2Q7Z408 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CSMD2Q7Z408 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSMD2Q7Z408 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSMD2Q7Z408 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSMD2Q7Z408 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CSMD2Q7Z408 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSMD2Q7Z408 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSMD2Q7Z408 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSMD2Q7Z408 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSMD2Q7Z408 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CSMD2Q7Z408 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CSMD2Q7Z408 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
CSMD2Q7Z408 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.83■□□□□ 0.29
CSMD2Q7Z408 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CSMD2Q7Z408 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CSMD2Q7Z408 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CSMD2Q7Z408 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CSMD2Q7Z408 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.29
CSMD2Q7Z408 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.83■□□□□ 0.29
CSMD2Q7Z408 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CSMD2Q7Z408 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CSMD2Q7Z408 AC092338.2-201ENST00000568827 1415 ntBASIC16.83■□□□□ 0.28
CSMD2Q7Z408 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSMD2Q7Z408 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSMD2Q7Z408 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.83■□□□□ 0.28
CSMD2Q7Z408 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSMD2Q7Z408 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.83■□□□□ 0.28
CSMD2Q7Z408 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
CSMD2Q7Z408 AC008622.2-201ENST00000617006 1229 ntBASIC16.83■□□□□ 0.28
CSMD2Q7Z408 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSMD2Q7Z408 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.83■□□□□ 0.28
CSMD2Q7Z408 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.83■□□□□ 0.28
CSMD2Q7Z408 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSMD2Q7Z408 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSMD2Q7Z408 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSMD2Q7Z408 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.83■□□□□ 0.28
CSMD2Q7Z408 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
CSMD2Q7Z408 AC139530.3-201ENST00000620344 690 ntBASIC16.83■□□□□ 0.28
CSMD2Q7Z408 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSMD2Q7Z408 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSMD2Q7Z408 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CSMD2Q7Z408 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSMD2Q7Z408 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSMD2Q7Z408 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSMD2Q7Z408 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.82■□□□□ 0.28
CSMD2Q7Z408 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.82■□□□□ 0.28
CSMD2Q7Z408 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
CSMD2Q7Z408 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.82■□□□□ 0.28
CSMD2Q7Z408 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSMD2Q7Z408 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CSMD2Q7Z408 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSMD2Q7Z408 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSMD2Q7Z408 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSMD2Q7Z408 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CSMD2Q7Z408 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSMD2Q7Z408 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CSMD2Q7Z408 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CSMD2Q7Z408 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.82■□□□□ 0.28
CSMD2Q7Z408 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.82■□□□□ 0.28
CSMD2Q7Z408 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CSMD2Q7Z408 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSMD2Q7Z408 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.82■□□□□ 0.28
CSMD2Q7Z408 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSMD2Q7Z408 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CSMD2Q7Z408 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSMD2Q7Z408 AC007663.1-201ENST00000438948 1240 ntBASIC16.82■□□□□ 0.28
CSMD2Q7Z408 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.82■□□□□ 0.28
CSMD2Q7Z408 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.82■□□□□ 0.28
CSMD2Q7Z408 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSMD2Q7Z408 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.81■□□□□ 0.28
CSMD2Q7Z408 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSMD2Q7Z408 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.81■□□□□ 0.28
CSMD2Q7Z408 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.81■□□□□ 0.28
CSMD2Q7Z408 VENTXP5-201ENST00000523979 775 ntBASIC16.81■□□□□ 0.28
CSMD2Q7Z408 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.81■□□□□ 0.28
CSMD2Q7Z408 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSMD2Q7Z408 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSMD2Q7Z408 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSMD2Q7Z408 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSMD2Q7Z408 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSMD2Q7Z408 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSMD2Q7Z408 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.81■□□□□ 0.28
CSMD2Q7Z408 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSMD2Q7Z408 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.81■□□□□ 0.28
CSMD2Q7Z408 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.81■□□□□ 0.28
CSMD2Q7Z408 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.81■□□□□ 0.28
CSMD2Q7Z408 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSMD2Q7Z408 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.81■□□□□ 0.28
CSMD2Q7Z408 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSMD2Q7Z408 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CSMD2Q7Z408 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.8■□□□□ 0.28
CSMD2Q7Z408 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSMD2Q7Z408 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.8■□□□□ 0.28
CSMD2Q7Z408 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSMD2Q7Z408 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms