Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF111Q6ZNA4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF111Q6ZNA4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF111Q6ZNA4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
RNF111Q6ZNA4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RNF111Q6ZNA4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF111Q6ZNA4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF111Q6ZNA4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF111Q6ZNA4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF111Q6ZNA4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF111Q6ZNA4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.24■□□□□ 0.67
RNF111Q6ZNA4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF111Q6ZNA4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF111Q6ZNA4 AC005181.1-201ENST00000604782 1256 ntBASIC19.24■□□□□ 0.67
RNF111Q6ZNA4 RAP2CP1-201ENST00000605103 478 ntBASIC19.24■□□□□ 0.67
RNF111Q6ZNA4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.24■□□□□ 0.67
RNF111Q6ZNA4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
RNF111Q6ZNA4 AC068338.2-201ENST00000563278 1430 ntBASIC19.24■□□□□ 0.67
RNF111Q6ZNA4 TREX1-205ENST00000625293 1783 ntBASIC19.24■□□□□ 0.67
RNF111Q6ZNA4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF111Q6ZNA4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF111Q6ZNA4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RNF111Q6ZNA4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RNF111Q6ZNA4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF111Q6ZNA4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF111Q6ZNA4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF111Q6ZNA4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF111Q6ZNA4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF111Q6ZNA4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF111Q6ZNA4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.23■□□□□ 0.67
RNF111Q6ZNA4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF111Q6ZNA4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF111Q6ZNA4 MIR663A-201ENST00000385250 93 ntBASIC19.23■□□□□ 0.67
RNF111Q6ZNA4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF111Q6ZNA4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF111Q6ZNA4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RNF111Q6ZNA4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF111Q6ZNA4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF111Q6ZNA4 AL162412.1-201ENST00000567129 965 ntBASIC19.23■□□□□ 0.67
RNF111Q6ZNA4 AC116050.2-201ENST00000612102 1779 ntBASIC19.23■□□□□ 0.67
RNF111Q6ZNA4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF111Q6ZNA4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF111Q6ZNA4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF111Q6ZNA4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RNF111Q6ZNA4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF111Q6ZNA4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF111Q6ZNA4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF111Q6ZNA4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RNF111Q6ZNA4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RNF111Q6ZNA4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF111Q6ZNA4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.22■□□□□ 0.67
RNF111Q6ZNA4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF111Q6ZNA4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF111Q6ZNA4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF111Q6ZNA4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF111Q6ZNA4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF111Q6ZNA4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF111Q6ZNA4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF111Q6ZNA4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF111Q6ZNA4 AC007322.3-201ENST00000426526 701 ntBASIC19.22■□□□□ 0.67
RNF111Q6ZNA4 CYP2T1P-201ENST00000432607 1285 ntBASIC19.22■□□□□ 0.67
RNF111Q6ZNA4 AC006970.2-201ENST00000450065 779 ntBASIC19.22■□□□□ 0.67
RNF111Q6ZNA4 AC090192.1-201ENST00000517740 490 ntBASIC19.22■□□□□ 0.67
RNF111Q6ZNA4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF111Q6ZNA4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.22■□□□□ 0.67
RNF111Q6ZNA4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF111Q6ZNA4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.22■□□□□ 0.67
RNF111Q6ZNA4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF111Q6ZNA4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF111Q6ZNA4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF111Q6ZNA4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF111Q6ZNA4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF111Q6ZNA4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF111Q6ZNA4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF111Q6ZNA4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF111Q6ZNA4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF111Q6ZNA4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF111Q6ZNA4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF111Q6ZNA4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RNF111Q6ZNA4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF111Q6ZNA4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF111Q6ZNA4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RNF111Q6ZNA4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF111Q6ZNA4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF111Q6ZNA4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RNF111Q6ZNA4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF111Q6ZNA4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF111Q6ZNA4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF111Q6ZNA4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF111Q6ZNA4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF111Q6ZNA4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF111Q6ZNA4 AC069236.1-201ENST00000604339 616 ntBASIC19.21■□□□□ 0.67
RNF111Q6ZNA4 AC008694.1-202ENST00000636953 945 ntBASIC19.21■□□□□ 0.67
RNF111Q6ZNA4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF111Q6ZNA4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.21■□□□□ 0.67
RNF111Q6ZNA4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF111Q6ZNA4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RNF111Q6ZNA4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF111Q6ZNA4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
RNF111Q6ZNA4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms