Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 SMUG1P1-201ENST00000590640 811 ntBASIC17.24■□□□□ 0.35
C11orf88Q6PI97 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
C11orf88Q6PI97 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
C11orf88Q6PI97 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C11orf88Q6PI97 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C11orf88Q6PI97 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C11orf88Q6PI97 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.23■□□□□ 0.35
C11orf88Q6PI97 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C11orf88Q6PI97 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
C11orf88Q6PI97 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C11orf88Q6PI97 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C11orf88Q6PI97 AP006587.3-201ENST00000525742 1516 ntBASIC17.23■□□□□ 0.35
C11orf88Q6PI97 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C11orf88Q6PI97 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C11orf88Q6PI97 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
C11orf88Q6PI97 AC090192.1-201ENST00000517740 490 ntBASIC17.23■□□□□ 0.35
C11orf88Q6PI97 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.23■□□□□ 0.35
C11orf88Q6PI97 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C11orf88Q6PI97 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.23■□□□□ 0.35
C11orf88Q6PI97 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.23■□□□□ 0.35
C11orf88Q6PI97 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.23■□□□□ 0.35
C11orf88Q6PI97 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C11orf88Q6PI97 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.23■□□□□ 0.35
C11orf88Q6PI97 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C11orf88Q6PI97 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.23■□□□□ 0.35
C11orf88Q6PI97 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C11orf88Q6PI97 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
C11orf88Q6PI97 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C11orf88Q6PI97 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C11orf88Q6PI97 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C11orf88Q6PI97 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.22■□□□□ 0.35
C11orf88Q6PI97 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
C11orf88Q6PI97 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C11orf88Q6PI97 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C11orf88Q6PI97 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
C11orf88Q6PI97 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
C11orf88Q6PI97 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.22■□□□□ 0.35
C11orf88Q6PI97 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C11orf88Q6PI97 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
C11orf88Q6PI97 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.22■□□□□ 0.35
C11orf88Q6PI97 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
C11orf88Q6PI97 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
C11orf88Q6PI97 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C11orf88Q6PI97 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C11orf88Q6PI97 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.22■□□□□ 0.35
C11orf88Q6PI97 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C11orf88Q6PI97 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.22■□□□□ 0.35
C11orf88Q6PI97 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C11orf88Q6PI97 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C11orf88Q6PI97 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.21■□□□□ 0.35
C11orf88Q6PI97 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C11orf88Q6PI97 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C11orf88Q6PI97 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
C11orf88Q6PI97 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C11orf88Q6PI97 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.21■□□□□ 0.35
C11orf88Q6PI97 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C11orf88Q6PI97 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
C11orf88Q6PI97 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.21■□□□□ 0.35
C11orf88Q6PI97 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C11orf88Q6PI97 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.21■□□□□ 0.35
C11orf88Q6PI97 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.21■□□□□ 0.35
C11orf88Q6PI97 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C11orf88Q6PI97 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
C11orf88Q6PI97 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
C11orf88Q6PI97 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
C11orf88Q6PI97 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
C11orf88Q6PI97 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C11orf88Q6PI97 TCF3P1-201ENST00000423021 1937 ntBASIC17.21■□□□□ 0.35
C11orf88Q6PI97 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C11orf88Q6PI97 BX005040.4-201ENST00000637145 1518 ntBASIC17.21■□□□□ 0.34
C11orf88Q6PI97 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms