Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRK2Q5S007 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRK2Q5S007 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRK2Q5S007 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRK2Q5S007 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRK2Q5S007 AC004951.3-201ENST00000418645 1148 ntBASIC17.34■□□□□ 0.37
LRRK2Q5S007 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.34■□□□□ 0.37
LRRK2Q5S007 MFAP1P1-201ENST00000442257 1255 ntBASIC17.34■□□□□ 0.37
LRRK2Q5S007 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.34■□□□□ 0.37
LRRK2Q5S007 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRK2Q5S007 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.33■□□□□ 0.37
LRRK2Q5S007 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRK2Q5S007 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRK2Q5S007 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.33■□□□□ 0.36
LRRK2Q5S007 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRK2Q5S007 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRK2Q5S007 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRK2Q5S007 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRRK2Q5S007 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRRK2Q5S007 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LRRK2Q5S007 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRK2Q5S007 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRRK2Q5S007 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRK2Q5S007 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRRK2Q5S007 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.33■□□□□ 0.36
LRRK2Q5S007 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LRRK2Q5S007 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRK2Q5S007 AC092183.1-201ENST00000469884 875 ntBASIC17.32■□□□□ 0.36
LRRK2Q5S007 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.32■□□□□ 0.36
LRRK2Q5S007 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRK2Q5S007 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
LRRK2Q5S007 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LRRK2Q5S007 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRK2Q5S007 FAM99A-202ENST00000538190 1989 ntBASIC17.32■□□□□ 0.36
LRRK2Q5S007 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRK2Q5S007 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LRRK2Q5S007 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRK2Q5S007 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRK2Q5S007 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRK2Q5S007 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
LRRK2Q5S007 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRK2Q5S007 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRK2Q5S007 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRK2Q5S007 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRK2Q5S007 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRK2Q5S007 KRT18P13-201ENST00000400056 1290 ntBASIC17.31■□□□□ 0.36
LRRK2Q5S007 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.31■□□□□ 0.36
LRRK2Q5S007 YBX1P10-201ENST00000444752 975 ntBASIC17.31■□□□□ 0.36
LRRK2Q5S007 AC008040.2-201ENST00000461049 708 ntBASIC17.31■□□□□ 0.36
LRRK2Q5S007 AP002469.2-201ENST00000531724 424 ntBASIC17.31■□□□□ 0.36
LRRK2Q5S007 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.31■□□□□ 0.36
LRRK2Q5S007 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.31■□□□□ 0.36
LRRK2Q5S007 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRK2Q5S007 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRK2Q5S007 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LRRK2Q5S007 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LRRK2Q5S007 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.31■□□□□ 0.36
LRRK2Q5S007 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRK2Q5S007 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRK2Q5S007 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRK2Q5S007 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRK2Q5S007 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRK2Q5S007 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRK2Q5S007 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRK2Q5S007 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRK2Q5S007 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.31■□□□□ 0.36
LRRK2Q5S007 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRK2Q5S007 AP006587.1-201ENST00000534129 1502 ntBASIC17.3■□□□□ 0.36
LRRK2Q5S007 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRK2Q5S007 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRK2Q5S007 EMBP1-201ENST00000458200 901 ntBASIC17.3■□□□□ 0.36
LRRK2Q5S007 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.3■□□□□ 0.36
LRRK2Q5S007 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRK2Q5S007 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRK2Q5S007 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.3■□□□□ 0.36
LRRK2Q5S007 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRK2Q5S007 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.3■□□□□ 0.36
LRRK2Q5S007 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.3■□□□□ 0.36
LRRK2Q5S007 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRK2Q5S007 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LRRK2Q5S007 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRK2Q5S007 AL662844.1-201ENST00000546340 181 ntBASIC17.3■□□□□ 0.36
LRRK2Q5S007 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LRRK2Q5S007 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.3■□□□□ 0.36
LRRK2Q5S007 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRK2Q5S007 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRK2Q5S007 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRK2Q5S007 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.3■□□□□ 0.36
LRRK2Q5S007 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRK2Q5S007 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRK2Q5S007 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LRRK2Q5S007 HMGN1P19-201ENST00000436976 333 ntBASIC17.29■□□□□ 0.36
LRRK2Q5S007 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.29■□□□□ 0.36
LRRK2Q5S007 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.29■□□□□ 0.36
LRRK2Q5S007 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.29■□□□□ 0.36
LRRK2Q5S007 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.29■□□□□ 0.36
LRRK2Q5S007 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
LRRK2Q5S007 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRK2Q5S007 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.29■□□□□ 0.36
LRRK2Q5S007 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms