Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST3H3Q16695 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HIST3H3Q16695 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
HIST3H3Q16695 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST3H3Q16695 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.54■□□□□ 0.4
HIST3H3Q16695 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.54■□□□□ 0.4
HIST3H3Q16695 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HIST3H3Q16695 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
HIST3H3Q16695 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST3H3Q16695 AC092368.3-202ENST00000574180 1591 ntBASIC17.53■□□□□ 0.4
HIST3H3Q16695 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.53■□□□□ 0.4
HIST3H3Q16695 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST3H3Q16695 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST3H3Q16695 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.53■□□□□ 0.4
HIST3H3Q16695 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST3H3Q16695 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST3H3Q16695 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.53■□□□□ 0.4
HIST3H3Q16695 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST3H3Q16695 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST3H3Q16695 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST3H3Q16695 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.53■□□□□ 0.4
HIST3H3Q16695 PNMA6B-201ENST00000538162 1200 ntBASIC17.53■□□□□ 0.4
HIST3H3Q16695 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HIST3H3Q16695 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HIST3H3Q16695 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
HIST3H3Q16695 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HIST3H3Q16695 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST3H3Q16695 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HIST3H3Q16695 AC116351.2-201ENST00000606540 1585 ntBASIC17.53■□□□□ 0.4
HIST3H3Q16695 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST3H3Q16695 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST3H3Q16695 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.53■□□□□ 0.4
HIST3H3Q16695 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HIST3H3Q16695 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIST3H3Q16695 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.52■□□□□ 0.4
HIST3H3Q16695 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
HIST3H3Q16695 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIST3H3Q16695 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HIST3H3Q16695 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIST3H3Q16695 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIST3H3Q16695 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HIST3H3Q16695 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.52■□□□□ 0.4
HIST3H3Q16695 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.52■□□□□ 0.4
HIST3H3Q16695 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
HIST3H3Q16695 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
HIST3H3Q16695 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
HIST3H3Q16695 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.52■□□□□ 0.39
HIST3H3Q16695 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HIST3H3Q16695 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.52■□□□□ 0.39
HIST3H3Q16695 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
HIST3H3Q16695 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
HIST3H3Q16695 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HIST3H3Q16695 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
HIST3H3Q16695 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.52■□□□□ 0.39
HIST3H3Q16695 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HIST3H3Q16695 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HIST3H3Q16695 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HIST3H3Q16695 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.51■□□□□ 0.39
HIST3H3Q16695 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST3H3Q16695 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.51■□□□□ 0.39
HIST3H3Q16695 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HIST3H3Q16695 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST3H3Q16695 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HIST3H3Q16695 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HIST3H3Q16695 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST3H3Q16695 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HIST3H3Q16695 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.51■□□□□ 0.39
HIST3H3Q16695 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HIST3H3Q16695 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST3H3Q16695 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.51■□□□□ 0.39
HIST3H3Q16695 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST3H3Q16695 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.51■□□□□ 0.39
HIST3H3Q16695 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
HIST3H3Q16695 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.51■□□□□ 0.39
HIST3H3Q16695 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.51■□□□□ 0.39
HIST3H3Q16695 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.51■□□□□ 0.39
HIST3H3Q16695 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HIST3H3Q16695 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.51■□□□□ 0.39
HIST3H3Q16695 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST3H3Q16695 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
HIST3H3Q16695 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.51■□□□□ 0.39
HIST3H3Q16695 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HIST3H3Q16695 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST3H3Q16695 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HIST3H3Q16695 TREX1-205ENST00000625293 1783 ntBASIC17.51■□□□□ 0.39
HIST3H3Q16695 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.51■□□□□ 0.39
HIST3H3Q16695 AC018553.1-201ENST00000616682 1458 ntBASIC17.5■□□□□ 0.39
HIST3H3Q16695 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.5■□□□□ 0.39
HIST3H3Q16695 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HIST3H3Q16695 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.5■□□□□ 0.39
HIST3H3Q16695 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.5■□□□□ 0.39
HIST3H3Q16695 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST3H3Q16695 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HIST3H3Q16695 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST3H3Q16695 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.5■□□□□ 0.39
HIST3H3Q16695 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.5■□□□□ 0.39
HIST3H3Q16695 AL355802.2-201ENST00000402069 882 ntBASIC17.5■□□□□ 0.39
HIST3H3Q16695 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HIST3H3Q16695 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.5■□□□□ 0.39
HIST3H3Q16695 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms