Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CDH13P55290 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH13P55290 KRT8P20-201ENST00000423953 1409 ntBASIC19.38■□□□□ 0.69
CDH13P55290 AC007322.1-201ENST00000426983 750 ntBASIC19.38■□□□□ 0.69
CDH13P55290 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.38■□□□□ 0.69
CDH13P55290 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH13P55290 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.38■□□□□ 0.69
CDH13P55290 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.38■□□□□ 0.69
CDH13P55290 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH13P55290 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CDH13P55290 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.38■□□□□ 0.69
CDH13P55290 AC009237.14-201ENST00000609975 1594 ntBASIC19.38■□□□□ 0.69
CDH13P55290 AC005332.7-201ENST00000614046 2005 ntBASIC19.38■□□□□ 0.69
CDH13P55290 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.38■□□□□ 0.69
CDH13P55290 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.38■□□□□ 0.69
CDH13P55290 AC008694.1-202ENST00000636953 945 ntBASIC19.38■□□□□ 0.69
CDH13P55290 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH13P55290 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH13P55290 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CDH13P55290 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH13P55290 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH13P55290 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.37■□□□□ 0.69
CDH13P55290 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH13P55290 KRT16P6-202ENST00000425692 1426 ntBASIC19.37■□□□□ 0.69
CDH13P55290 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH13P55290 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH13P55290 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH13P55290 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH13P55290 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH13P55290 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH13P55290 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH13P55290 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH13P55290 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.37■□□□□ 0.69
CDH13P55290 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH13P55290 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH13P55290 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH13P55290 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH13P55290 AC231657.2-201ENST00000624556 255 ntBASIC19.37■□□□□ 0.69
CDH13P55290 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.37■□□□□ 0.69
CDH13P55290 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CDH13P55290 AC098818.2-201ENST00000564925 2320 ntBASIC19.37■□□□□ 0.69
CDH13P55290 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CDH13P55290 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH13P55290 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH13P55290 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH13P55290 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH13P55290 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH13P55290 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH13P55290 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH13P55290 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CDH13P55290 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH13P55290 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH13P55290 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH13P55290 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.36■□□□□ 0.69
CDH13P55290 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH13P55290 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.36■□□□□ 0.69
CDH13P55290 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CDH13P55290 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH13P55290 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH13P55290 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH13P55290 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.36■□□□□ 0.69
CDH13P55290 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH13P55290 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.36■□□□□ 0.69
CDH13P55290 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH13P55290 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH13P55290 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH13P55290 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH13P55290 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH13P55290 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH13P55290 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CDH13P55290 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH13P55290 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH13P55290 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.35■□□□□ 0.69
CDH13P55290 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.35■□□□□ 0.69
CDH13P55290 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH13P55290 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CDH13P55290 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.35■□□□□ 0.69
CDH13P55290 AC010980.2-201ENST00000587099 1412 ntBASIC19.35■□□□□ 0.69
CDH13P55290 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH13P55290 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.35■□□□□ 0.69
CDH13P55290 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.35■□□□□ 0.69
CDH13P55290 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.35■□□□□ 0.69
CDH13P55290 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH13P55290 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH13P55290 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH13P55290 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH13P55290 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CDH13P55290 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH13P55290 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
CDH13P55290 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CDH13P55290 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH13P55290 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH13P55290 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CDH13P55290 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH13P55290 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.35■□□□□ 0.69
CDH13P55290 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CDH13P55290 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH13P55290 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.35■□□□□ 0.69
CDH13P55290 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.34■□□□□ 0.69
CDH13P55290 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms