Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.45■□□□□ 0.86
PMS2P54278 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PMS2P54278 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PMS2P54278 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.45■□□□□ 0.86
PMS2P54278 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PMS2P54278 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PMS2P54278 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.45■□□□□ 0.86
PMS2P54278 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PMS2P54278 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.45■□□□□ 0.86
PMS2P54278 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PMS2P54278 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.45■□□□□ 0.86
PMS2P54278 SLC7A5P2-201ENST00000553010 536 ntBASIC20.45■□□□□ 0.86
PMS2P54278 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.45■□□□□ 0.86
PMS2P54278 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PMS2P54278 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PMS2P54278 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.45■□□□□ 0.86
PMS2P54278 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PMS2P54278 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PMS2P54278 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.45■□□□□ 0.86
PMS2P54278 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PMS2P54278 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.45■□□□□ 0.86
PMS2P54278 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PMS2P54278 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
PMS2P54278 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PMS2P54278 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PMS2P54278 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PMS2P54278 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.44■□□□□ 0.86
PMS2P54278 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.44■□□□□ 0.86
PMS2P54278 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PMS2P54278 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PMS2P54278 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.44■□□□□ 0.86
PMS2P54278 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
PMS2P54278 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PMS2P54278 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PMS2P54278 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PMS2P54278 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.44■□□□□ 0.86
PMS2P54278 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.44■□□□□ 0.86
PMS2P54278 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.44■□□□□ 0.86
PMS2P54278 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.44■□□□□ 0.86
PMS2P54278 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.44■□□□□ 0.86
PMS2P54278 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.44■□□□□ 0.86
PMS2P54278 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PMS2P54278 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.44■□□□□ 0.86
PMS2P54278 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PMS2P54278 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.44■□□□□ 0.86
PMS2P54278 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PMS2P54278 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PMS2P54278 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
PMS2P54278 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.44■□□□□ 0.86
PMS2P54278 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.44■□□□□ 0.86
PMS2P54278 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
PMS2P54278 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PMS2P54278 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PMS2P54278 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.43■□□□□ 0.86
PMS2P54278 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.43■□□□□ 0.86
PMS2P54278 AC091799.1-201ENST00000422823 811 ntBASIC20.43■□□□□ 0.86
PMS2P54278 AC007322.3-201ENST00000426526 701 ntBASIC20.43■□□□□ 0.86
PMS2P54278 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.43■□□□□ 0.86
PMS2P54278 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.43■□□□□ 0.86
PMS2P54278 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PMS2P54278 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PMS2P54278 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PMS2P54278 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.43■□□□□ 0.86
PMS2P54278 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
PMS2P54278 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PMS2P54278 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PMS2P54278 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PMS2P54278 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PMS2P54278 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PMS2P54278 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PMS2P54278 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.42■□□□□ 0.86
PMS2P54278 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PMS2P54278 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
PMS2P54278 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PMS2P54278 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.42■□□□□ 0.86
PMS2P54278 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PMS2P54278 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.42■□□□□ 0.86
PMS2P54278 RAP2CP1-201ENST00000605103 478 ntBASIC20.42■□□□□ 0.86
PMS2P54278 FAM21FP-204ENST00000608637 956 ntBASIC20.42■□□□□ 0.86
PMS2P54278 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PMS2P54278 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PMS2P54278 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.42■□□□□ 0.86
PMS2P54278 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
PMS2P54278 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMS2P54278 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMS2P54278 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
PMS2P54278 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.41■□□□□ 0.86
PMS2P54278 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMS2P54278 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMS2P54278 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMS2P54278 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PMS2P54278 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.41■□□□□ 0.86
PMS2P54278 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMS2P54278 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.41■□□□□ 0.86
PMS2P54278 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PMS2P54278 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
PMS2P54278 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.41■□□□□ 0.86
PMS2P54278 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.41■□□□□ 0.86
PMS2P54278 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PMS2P54278 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms