Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLNS1AP54105 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLNS1AP54105 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLNS1AP54105 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
CLNS1AP54105 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
CLNS1AP54105 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLNS1AP54105 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CLNS1AP54105 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.69■□□□□ 0.74
CLNS1AP54105 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CLNS1AP54105 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLNS1AP54105 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLNS1AP54105 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLNS1AP54105 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLNS1AP54105 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.68■□□□□ 0.74
CLNS1AP54105 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLNS1AP54105 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLNS1AP54105 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLNS1AP54105 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CLNS1AP54105 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLNS1AP54105 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
CLNS1AP54105 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLNS1AP54105 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLNS1AP54105 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CLNS1AP54105 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLNS1AP54105 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.68■□□□□ 0.74
CLNS1AP54105 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.68■□□□□ 0.74
CLNS1AP54105 AL031432.3-201ENST00000607698 485 ntBASIC19.68■□□□□ 0.74
CLNS1AP54105 AL358852.1-201ENST00000623174 1268 ntBASIC19.68■□□□□ 0.74
CLNS1AP54105 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.68■□□□□ 0.74
CLNS1AP54105 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLNS1AP54105 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLNS1AP54105 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.68■□□□□ 0.74
CLNS1AP54105 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.68■□□□□ 0.74
CLNS1AP54105 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
CLNS1AP54105 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLNS1AP54105 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLNS1AP54105 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLNS1AP54105 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLNS1AP54105 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLNS1AP54105 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CLNS1AP54105 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLNS1AP54105 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLNS1AP54105 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLNS1AP54105 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLNS1AP54105 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLNS1AP54105 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLNS1AP54105 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLNS1AP54105 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLNS1AP54105 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLNS1AP54105 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.67■□□□□ 0.74
CLNS1AP54105 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.67■□□□□ 0.74
CLNS1AP54105 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.67■□□□□ 0.74
CLNS1AP54105 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.67■□□□□ 0.74
CLNS1AP54105 AC018470.1-201ENST00000624790 3129 ntBASIC19.67■□□□□ 0.74
CLNS1AP54105 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.67■□□□□ 0.74
CLNS1AP54105 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.67■□□□□ 0.74
CLNS1AP54105 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLNS1AP54105 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLNS1AP54105 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLNS1AP54105 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.67■□□□□ 0.74
CLNS1AP54105 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLNS1AP54105 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLNS1AP54105 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLNS1AP54105 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.66■□□□□ 0.74
CLNS1AP54105 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLNS1AP54105 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
CLNS1AP54105 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.66■□□□□ 0.74
CLNS1AP54105 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.66■□□□□ 0.74
CLNS1AP54105 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.66■□□□□ 0.74
CLNS1AP54105 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLNS1AP54105 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLNS1AP54105 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.66■□□□□ 0.74
CLNS1AP54105 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLNS1AP54105 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLNS1AP54105 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLNS1AP54105 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLNS1AP54105 KRT87P-202ENST00000534226 1464 ntBASIC19.66■□□□□ 0.74
CLNS1AP54105 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLNS1AP54105 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.66■□□□□ 0.74
CLNS1AP54105 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLNS1AP54105 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLNS1AP54105 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLNS1AP54105 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.65■□□□□ 0.74
CLNS1AP54105 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLNS1AP54105 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CLNS1AP54105 AL162377.1-201ENST00000618844 1793 ntBASIC19.65■□□□□ 0.74
CLNS1AP54105 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLNS1AP54105 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CLNS1AP54105 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CLNS1AP54105 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLNS1AP54105 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.65■□□□□ 0.74
CLNS1AP54105 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.65■□□□□ 0.74
CLNS1AP54105 AC079140.4-201ENST00000507448 529 ntBASIC19.65■□□□□ 0.74
CLNS1AP54105 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.65■□□□□ 0.74
CLNS1AP54105 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLNS1AP54105 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLNS1AP54105 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLNS1AP54105 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CLNS1AP54105 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.65■□□□□ 0.74
CLNS1AP54105 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 191.4 ms