Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
POLR2JP52435 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
POLR2JP52435 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR2JP52435 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR2JP52435 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.96■□□□□ 0.63
POLR2JP52435 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR2JP52435 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR2JP52435 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
POLR2JP52435 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR2JP52435 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.96■□□□□ 0.63
POLR2JP52435 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
POLR2JP52435 AL031963.3-201ENST00000606441 850 ntBASIC18.96■□□□□ 0.63
POLR2JP52435 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
POLR2JP52435 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR2JP52435 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.96■□□□□ 0.63
POLR2JP52435 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR2JP52435 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
POLR2JP52435 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR2JP52435 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR2JP52435 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.96■□□□□ 0.63
POLR2JP52435 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR2JP52435 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.96■□□□□ 0.63
POLR2JP52435 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
POLR2JP52435 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.95■□□□□ 0.62
POLR2JP52435 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.95■□□□□ 0.62
POLR2JP52435 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2JP52435 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2JP52435 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2JP52435 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2JP52435 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2JP52435 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2JP52435 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
POLR2JP52435 AP001271.2-201ENST00000624018 1556 ntBASIC18.95■□□□□ 0.62
POLR2JP52435 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.95■□□□□ 0.62
POLR2JP52435 KRT8P20-201ENST00000423953 1409 ntBASIC18.95■□□□□ 0.62
POLR2JP52435 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2JP52435 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2JP52435 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
POLR2JP52435 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2JP52435 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2JP52435 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.95■□□□□ 0.62
POLR2JP52435 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2JP52435 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.95■□□□□ 0.62
POLR2JP52435 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.95■□□□□ 0.62
POLR2JP52435 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
POLR2JP52435 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2JP52435 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2JP52435 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2JP52435 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.95■□□□□ 0.62
POLR2JP52435 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
POLR2JP52435 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2JP52435 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR2JP52435 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
POLR2JP52435 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
POLR2JP52435 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
POLR2JP52435 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
POLR2JP52435 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
POLR2JP52435 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
POLR2JP52435 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR2JP52435 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
POLR2JP52435 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
POLR2JP52435 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
POLR2JP52435 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR2JP52435 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
POLR2JP52435 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR2JP52435 AC007322.4-201ENST00000509611 723 ntBASIC18.94■□□□□ 0.62
POLR2JP52435 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
POLR2JP52435 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.94■□□□□ 0.62
POLR2JP52435 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR2JP52435 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
POLR2JP52435 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
POLR2JP52435 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.94■□□□□ 0.62
POLR2JP52435 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
POLR2JP52435 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
POLR2JP52435 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.93■□□□□ 0.62
POLR2JP52435 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR2JP52435 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
POLR2JP52435 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
POLR2JP52435 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR2JP52435 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR2JP52435 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR2JP52435 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
POLR2JP52435 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR2JP52435 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.93■□□□□ 0.62
POLR2JP52435 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.93■□□□□ 0.62
POLR2JP52435 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.93■□□□□ 0.62
POLR2JP52435 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR2JP52435 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR2JP52435 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR2JP52435 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR2JP52435 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR2JP52435 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.93■□□□□ 0.62
POLR2JP52435 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.93■□□□□ 0.62
POLR2JP52435 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR2JP52435 AC013268.1-206ENST00000638368 961 ntBASIC18.93■□□□□ 0.62
POLR2JP52435 AC112229.1-201ENST00000639295 961 ntBASIC18.93■□□□□ 0.62
POLR2JP52435 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
POLR2JP52435 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
POLR2JP52435 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
POLR2JP52435 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms