Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 AC009237.14-201ENST00000609975 1594 ntBASIC19.22■□□□□ 0.67
KRT6CP48668 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.22■□□□□ 0.67
KRT6CP48668 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.22■□□□□ 0.67
KRT6CP48668 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT6CP48668 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT6CP48668 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KRT6CP48668 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
KRT6CP48668 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT6CP48668 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT6CP48668 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
KRT6CP48668 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRT6CP48668 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.21■□□□□ 0.67
KRT6CP48668 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.21■□□□□ 0.67
KRT6CP48668 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
KRT6CP48668 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRT6CP48668 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT6CP48668 C2orf69P4-201ENST00000565394 541 ntBASIC19.21■□□□□ 0.67
KRT6CP48668 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.21■□□□□ 0.67
KRT6CP48668 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT6CP48668 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT6CP48668 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRT6CP48668 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT6CP48668 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT6CP48668 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT6CP48668 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.21■□□□□ 0.67
KRT6CP48668 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
KRT6CP48668 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.2■□□□□ 0.66
KRT6CP48668 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
KRT6CP48668 AL158211.5-201ENST00000623583 2518 ntBASIC19.2■□□□□ 0.66
KRT6CP48668 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6CP48668 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6CP48668 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6CP48668 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6CP48668 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6CP48668 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6CP48668 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
KRT6CP48668 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6CP48668 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.2■□□□□ 0.66
KRT6CP48668 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6CP48668 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.2■□□□□ 0.66
KRT6CP48668 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6CP48668 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6CP48668 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6CP48668 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6CP48668 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6CP48668 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
KRT6CP48668 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6CP48668 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT6CP48668 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.2■□□□□ 0.66
KRT6CP48668 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
KRT6CP48668 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.19■□□□□ 0.66
KRT6CP48668 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
KRT6CP48668 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6CP48668 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6CP48668 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6CP48668 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6CP48668 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6CP48668 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6CP48668 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6CP48668 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6CP48668 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
KRT6CP48668 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6CP48668 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.19■□□□□ 0.66
KRT6CP48668 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
KRT6CP48668 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.19■□□□□ 0.66
KRT6CP48668 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6CP48668 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.19■□□□□ 0.66
KRT6CP48668 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.19■□□□□ 0.66
KRT6CP48668 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6CP48668 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
KRT6CP48668 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT6CP48668 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.19■□□□□ 0.66
KRT6CP48668 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT6CP48668 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT6CP48668 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6CP48668 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6CP48668 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6CP48668 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
KRT6CP48668 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
KRT6CP48668 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
KRT6CP48668 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT6CP48668 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6CP48668 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6CP48668 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT6CP48668 AC004911.1-201ENST00000416316 871 ntBASIC19.18■□□□□ 0.66
KRT6CP48668 AC093787.1-201ENST00000450396 207 ntBASIC19.18■□□□□ 0.66
KRT6CP48668 AC023632.3-201ENST00000521633 145 ntBASIC19.18■□□□□ 0.66
KRT6CP48668 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT6CP48668 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.18■□□□□ 0.66
KRT6CP48668 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6CP48668 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.18■□□□□ 0.66
KRT6CP48668 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT6CP48668 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
KRT6CP48668 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6CP48668 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT6CP48668 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.18■□□□□ 0.66
KRT6CP48668 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6CP48668 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.17■□□□□ 0.66
KRT6CP48668 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT6CP48668 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms