Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCNFP41002 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CCNFP41002 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCNFP41002 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.95■□□□□ 0.78
CCNFP41002 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.95■□□□□ 0.78
CCNFP41002 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCNFP41002 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.94■□□□□ 0.78
CCNFP41002 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCNFP41002 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCNFP41002 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.94■□□□□ 0.78
CCNFP41002 MCRIP2P1-201ENST00000394346 511 ntBASIC19.94■□□□□ 0.78
CCNFP41002 CROCCP5-201ENST00000436658 830 ntBASIC19.94■□□□□ 0.78
CCNFP41002 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCNFP41002 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCNFP41002 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCNFP41002 AC026471.1-201ENST00000564629 3026 ntBASIC19.94■□□□□ 0.78
CCNFP41002 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCNFP41002 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CCNFP41002 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.93■□□□□ 0.78
CCNFP41002 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCNFP41002 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.93■□□□□ 0.78
CCNFP41002 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCNFP41002 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCNFP41002 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.93■□□□□ 0.78
CCNFP41002 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.93■□□□□ 0.78
CCNFP41002 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.93■□□□□ 0.78
CCNFP41002 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCNFP41002 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CCNFP41002 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCNFP41002 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCNFP41002 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.93■□□□□ 0.78
CCNFP41002 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.93■□□□□ 0.78
CCNFP41002 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
CCNFP41002 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCNFP41002 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.93■□□□□ 0.78
CCNFP41002 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCNFP41002 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.92■□□□□ 0.78
CCNFP41002 CYP21A1P-202ENST00000354927 1481 ntBASIC19.92■□□□□ 0.78
CCNFP41002 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCNFP41002 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CCNFP41002 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.92■□□□□ 0.78
CCNFP41002 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCNFP41002 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCNFP41002 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCNFP41002 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCNFP41002 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCNFP41002 AF201337.1-201ENST00000520239 748 ntBASIC19.92■□□□□ 0.78
CCNFP41002 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.92■□□□□ 0.78
CCNFP41002 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.92■□□□□ 0.78
CCNFP41002 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCNFP41002 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.92■□□□□ 0.78
CCNFP41002 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCNFP41002 AC087633.2-202ENST00000565166 1439 ntBASIC19.92■□□□□ 0.78
CCNFP41002 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCNFP41002 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CCNFP41002 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCNFP41002 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCNFP41002 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCNFP41002 AC009237.14-201ENST00000609975 1594 ntBASIC19.91■□□□□ 0.78
CCNFP41002 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.91■□□□□ 0.78
CCNFP41002 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCNFP41002 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCNFP41002 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCNFP41002 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCNFP41002 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.91■□□□□ 0.78
CCNFP41002 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.91■□□□□ 0.78
CCNFP41002 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCNFP41002 AL356652.1-201ENST00000615962 565 ntBASIC19.91■□□□□ 0.78
CCNFP41002 AL050303.2-201ENST00000619798 666 ntBASIC19.91■□□□□ 0.78
CCNFP41002 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCNFP41002 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCNFP41002 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.91■□□□□ 0.78
CCNFP41002 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCNFP41002 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCNFP41002 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCNFP41002 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.91■□□□□ 0.78
CCNFP41002 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.9■□□□□ 0.78
CCNFP41002 Z82202.1-201ENST00000623446 1880 ntBASIC19.9■□□□□ 0.78
CCNFP41002 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCNFP41002 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CCNFP41002 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.9■□□□□ 0.78
CCNFP41002 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
CCNFP41002 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCNFP41002 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CCNFP41002 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCNFP41002 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCNFP41002 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCNFP41002 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCNFP41002 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
CCNFP41002 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.9■□□□□ 0.78
CCNFP41002 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.9■□□□□ 0.78
CCNFP41002 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.9■□□□□ 0.78
CCNFP41002 AL121832.2-201ENST00000610979 668 ntBASIC19.9■□□□□ 0.78
CCNFP41002 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCNFP41002 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCNFP41002 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCNFP41002 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCNFP41002 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCNFP41002 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCNFP41002 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms