Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
PTPN6P29350 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN6P29350 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN6P29350 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN6P29350 SLC29A4P1-201ENST00000398760 971 ntBASIC18.82■□□□□ 0.6
PTPN6P29350 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN6P29350 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PTPN6P29350 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.82■□□□□ 0.6
PTPN6P29350 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPN6P29350 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.82■□□□□ 0.6
PTPN6P29350 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
PTPN6P29350 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPN6P29350 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
PTPN6P29350 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN6P29350 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN6P29350 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN6P29350 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN6P29350 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN6P29350 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN6P29350 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN6P29350 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN6P29350 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN6P29350 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPN6P29350 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN6P29350 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN6P29350 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN6P29350 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN6P29350 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN6P29350 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN6P29350 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.81■□□□□ 0.6
PTPN6P29350 AL355802.2-201ENST00000402069 882 ntBASIC18.81■□□□□ 0.6
PTPN6P29350 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN6P29350 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.81■□□□□ 0.6
PTPN6P29350 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.81■□□□□ 0.6
PTPN6P29350 AC100791.3-201ENST00000617619 330 ntBASIC18.81■□□□□ 0.6
PTPN6P29350 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.81■□□□□ 0.6
PTPN6P29350 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.81■□□□□ 0.6
PTPN6P29350 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN6P29350 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN6P29350 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN6P29350 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN6P29350 KRT8P17-201ENST00000453110 1448 ntBASIC18.81■□□□□ 0.6
PTPN6P29350 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.81■□□□□ 0.6
PTPN6P29350 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN6P29350 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.81■□□□□ 0.6
PTPN6P29350 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN6P29350 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN6P29350 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.8■□□□□ 0.6
PTPN6P29350 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN6P29350 MKRN4P-201ENST00000444706 1521 ntBASIC18.8■□□□□ 0.6
PTPN6P29350 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
PTPN6P29350 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN6P29350 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN6P29350 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN6P29350 AC142086.2-201ENST00000569753 217 ntBASIC18.8■□□□□ 0.6
PTPN6P29350 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.8■□□□□ 0.6
PTPN6P29350 AL020996.1-203ENST00000536896 2307 ntBASIC18.8■□□□□ 0.6
PTPN6P29350 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN6P29350 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.8■□□□□ 0.6
PTPN6P29350 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN6P29350 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PTPN6P29350 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN6P29350 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PTPN6P29350 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN6P29350 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN6P29350 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.8■□□□□ 0.6
PTPN6P29350 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN6P29350 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN6P29350 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.79■□□□□ 0.6
PTPN6P29350 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN6P29350 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN6P29350 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN6P29350 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PTPN6P29350 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN6P29350 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN6P29350 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN6P29350 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN6P29350 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN6P29350 AP000974.1-201ENST00000623909 2387 ntBASIC18.79■□□□□ 0.6
PTPN6P29350 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN6P29350 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN6P29350 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN6P29350 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.79■□□□□ 0.6
PTPN6P29350 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN6P29350 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN6P29350 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN6P29350 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN6P29350 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN6P29350 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN6P29350 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.78■□□□□ 0.6
PTPN6P29350 AC010980.2-201ENST00000587099 1412 ntBASIC18.78■□□□□ 0.6
PTPN6P29350 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN6P29350 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PTPN6P29350 MCRIP2P1-201ENST00000394346 511 ntBASIC18.78■□□□□ 0.6
PTPN6P29350 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.78■□□□□ 0.6
PTPN6P29350 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.78■□□□□ 0.6
PTPN6P29350 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.78■□□□□ 0.6
PTPN6P29350 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PTPN6P29350 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.78■□□□□ 0.6
PTPN6P29350 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms