Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.01■□□□□ 0.47
GDF1P27539 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GDF1P27539 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
GDF1P27539 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18■□□□□ 0.47
GDF1P27539 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18■□□□□ 0.47
GDF1P27539 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GDF1P27539 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GDF1P27539 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
GDF1P27539 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18■□□□□ 0.47
GDF1P27539 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18■□□□□ 0.47
GDF1P27539 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18■□□□□ 0.47
GDF1P27539 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18■□□□□ 0.47
GDF1P27539 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18■□□□□ 0.47
GDF1P27539 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18■□□□□ 0.47
GDF1P27539 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
GDF1P27539 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
GDF1P27539 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GDF1P27539 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
GDF1P27539 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
GDF1P27539 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GDF1P27539 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18■□□□□ 0.47
GDF1P27539 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
GDF1P27539 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
GDF1P27539 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18■□□□□ 0.47
GDF1P27539 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
GDF1P27539 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GDF1P27539 CLDN5-201ENST00000403084 2357 ntBASIC17.99■□□□□ 0.47
GDF1P27539 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GDF1P27539 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.99■□□□□ 0.47
GDF1P27539 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GDF1P27539 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GDF1P27539 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GDF1P27539 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
GDF1P27539 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.99■□□□□ 0.47
GDF1P27539 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
GDF1P27539 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
GDF1P27539 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
GDF1P27539 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GDF1P27539 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
GDF1P27539 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
GDF1P27539 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GDF1P27539 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
GDF1P27539 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
GDF1P27539 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GDF1P27539 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.99■□□□□ 0.47
GDF1P27539 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.99■□□□□ 0.47
GDF1P27539 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GDF1P27539 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
GDF1P27539 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.98■□□□□ 0.47
GDF1P27539 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
GDF1P27539 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
GDF1P27539 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GDF1P27539 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
GDF1P27539 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.98■□□□□ 0.47
GDF1P27539 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GDF1P27539 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GDF1P27539 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
GDF1P27539 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
GDF1P27539 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
GDF1P27539 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GDF1P27539 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GDF1P27539 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.98■□□□□ 0.47
GDF1P27539 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.98■□□□□ 0.47
GDF1P27539 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.98■□□□□ 0.47
GDF1P27539 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.98■□□□□ 0.47
GDF1P27539 AC004264.1-201ENST00000608354 794 ntBASIC17.98■□□□□ 0.47
GDF1P27539 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
GDF1P27539 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GDF1P27539 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GDF1P27539 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GDF1P27539 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
GDF1P27539 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
GDF1P27539 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GDF1P27539 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.98■□□□□ 0.47
GDF1P27539 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GDF1P27539 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.98■□□□□ 0.47
GDF1P27539 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GDF1P27539 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GDF1P27539 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
GDF1P27539 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
GDF1P27539 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.98■□□□□ 0.47
GDF1P27539 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
GDF1P27539 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GDF1P27539 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.97■□□□□ 0.47
GDF1P27539 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GDF1P27539 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GDF1P27539 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.97■□□□□ 0.47
GDF1P27539 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GDF1P27539 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.97■□□□□ 0.47
GDF1P27539 Z99916.2-201ENST00000604037 246 ntBASIC17.97■□□□□ 0.47
GDF1P27539 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
GDF1P27539 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GDF1P27539 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GDF1P27539 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.97■□□□□ 0.47
GDF1P27539 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GDF1P27539 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
GDF1P27539 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GDF1P27539 AL135905.2-201ENST00000584934 1404 ntBASIC17.97■□□□□ 0.47
GDF1P27539 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GDF1P27539 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms