Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.46■□□□□ 0.71
VARSP26640 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.46■□□□□ 0.71
VARSP26640 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.46■□□□□ 0.71
VARSP26640 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VARSP26640 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.46■□□□□ 0.71
VARSP26640 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.46■□□□□ 0.71
VARSP26640 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.46■□□□□ 0.71
VARSP26640 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.46■□□□□ 0.71
VARSP26640 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.46■□□□□ 0.71
VARSP26640 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.46■□□□□ 0.71
VARSP26640 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.46■□□□□ 0.71
VARSP26640 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.46■□□□□ 0.71
VARSP26640 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VARSP26640 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.46■□□□□ 0.71
VARSP26640 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VARSP26640 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VARSP26640 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
VARSP26640 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VARSP26640 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
VARSP26640 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VARSP26640 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VARSP26640 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VARSP26640 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VARSP26640 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VARSP26640 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VARSP26640 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.45■□□□□ 0.7
VARSP26640 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VARSP26640 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VARSP26640 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.45■□□□□ 0.7
VARSP26640 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
VARSP26640 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.45■□□□□ 0.7
VARSP26640 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VARSP26640 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
VARSP26640 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.45■□□□□ 0.7
VARSP26640 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VARSP26640 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.45■□□□□ 0.7
VARSP26640 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.45■□□□□ 0.7
VARSP26640 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.45■□□□□ 0.7
VARSP26640 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.45■□□□□ 0.7
VARSP26640 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VARSP26640 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
VARSP26640 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
VARSP26640 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VARSP26640 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VARSP26640 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VARSP26640 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
VARSP26640 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
VARSP26640 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
VARSP26640 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
VARSP26640 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
VARSP26640 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
VARSP26640 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VARSP26640 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VARSP26640 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
VARSP26640 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VARSP26640 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VARSP26640 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VARSP26640 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
VARSP26640 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
VARSP26640 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.44■□□□□ 0.7
VARSP26640 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VARSP26640 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VARSP26640 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.44■□□□□ 0.7
VARSP26640 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.44■□□□□ 0.7
VARSP26640 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VARSP26640 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.44■□□□□ 0.7
VARSP26640 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.44■□□□□ 0.7
VARSP26640 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VARSP26640 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
VARSP26640 AL589743.5-201ENST00000616611 1050 ntBASIC19.44■□□□□ 0.7
VARSP26640 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
VARSP26640 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.44■□□□□ 0.7
VARSP26640 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VARSP26640 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VARSP26640 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
VARSP26640 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VARSP26640 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.44■□□□□ 0.7
VARSP26640 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.44■□□□□ 0.7
VARSP26640 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VARSP26640 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VARSP26640 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VARSP26640 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VARSP26640 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VARSP26640 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.43■□□□□ 0.7
VARSP26640 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VARSP26640 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VARSP26640 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VARSP26640 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VARSP26640 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.43■□□□□ 0.7
VARSP26640 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VARSP26640 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VARSP26640 BX276092.2-201ENST00000417668 665 ntBASIC19.43■□□□□ 0.7
VARSP26640 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VARSP26640 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
VARSP26640 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VARSP26640 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.43■□□□□ 0.7
VARSP26640 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VARSP26640 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
VARSP26640 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VARSP26640 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms