Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.92■□□□□ 0.78
CCND1P24385 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCND1P24385 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCND1P24385 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCND1P24385 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.92■□□□□ 0.78
CCND1P24385 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.92■□□□□ 0.78
CCND1P24385 FAM21FP-204ENST00000608637 956 ntBASIC19.92■□□□□ 0.78
CCND1P24385 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CCND1P24385 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.92■□□□□ 0.78
CCND1P24385 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCND1P24385 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CCND1P24385 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCND1P24385 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.92■□□□□ 0.78
CCND1P24385 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.92■□□□□ 0.78
CCND1P24385 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCND1P24385 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCND1P24385 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCND1P24385 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCND1P24385 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.92■□□□□ 0.78
CCND1P24385 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCND1P24385 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.91■□□□□ 0.78
CCND1P24385 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCND1P24385 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCND1P24385 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCND1P24385 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCND1P24385 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCND1P24385 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCND1P24385 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCND1P24385 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
CCND1P24385 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CCND1P24385 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCND1P24385 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.91■□□□□ 0.78
CCND1P24385 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.91■□□□□ 0.78
CCND1P24385 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCND1P24385 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CCND1P24385 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCND1P24385 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCND1P24385 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCND1P24385 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.91■□□□□ 0.78
CCND1P24385 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCND1P24385 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCND1P24385 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.91■□□□□ 0.78
CCND1P24385 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCND1P24385 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCND1P24385 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCND1P24385 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CCND1P24385 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.9■□□□□ 0.78
CCND1P24385 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CCND1P24385 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.9■□□□□ 0.78
CCND1P24385 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.9■□□□□ 0.78
CCND1P24385 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCND1P24385 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.9■□□□□ 0.78
CCND1P24385 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCND1P24385 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.9■□□□□ 0.78
CCND1P24385 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCND1P24385 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCND1P24385 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CCND1P24385 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCND1P24385 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCND1P24385 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CCND1P24385 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
CCND1P24385 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.89■□□□□ 0.78
CCND1P24385 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.89■□□□□ 0.78
CCND1P24385 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCND1P24385 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCND1P24385 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCND1P24385 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCND1P24385 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCND1P24385 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CCND1P24385 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.89■□□□□ 0.77
CCND1P24385 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.89■□□□□ 0.77
CCND1P24385 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCND1P24385 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCND1P24385 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CCND1P24385 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.89■□□□□ 0.77
CCND1P24385 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCND1P24385 AC092437.1-201ENST00000624794 1048 ntBASIC19.89■□□□□ 0.77
CCND1P24385 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.89■□□□□ 0.77
CCND1P24385 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCND1P24385 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCND1P24385 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCND1P24385 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCND1P24385 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCND1P24385 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCND1P24385 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.88■□□□□ 0.77
CCND1P24385 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CCND1P24385 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.88■□□□□ 0.77
CCND1P24385 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.88■□□□□ 0.77
CCND1P24385 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.88■□□□□ 0.77
CCND1P24385 AC007322.1-201ENST00000426983 750 ntBASIC19.88■□□□□ 0.77
CCND1P24385 CNN2P6-201ENST00000439038 900 ntBASIC19.88■□□□□ 0.77
CCND1P24385 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.88■□□□□ 0.77
CCND1P24385 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCND1P24385 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.88■□□□□ 0.77
CCND1P24385 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCND1P24385 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCND1P24385 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCND1P24385 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCND1P24385 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCND1P24385 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms