Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
MMP8P22894 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.9■□□□□ 0.94
MMP8P22894 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP8P22894 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MMP8P22894 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.9■□□□□ 0.94
MMP8P22894 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MMP8P22894 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
MMP8P22894 AC092368.3-202ENST00000574180 1591 ntBASIC20.9■□□□□ 0.94
MMP8P22894 AC116351.2-201ENST00000606540 1585 ntBASIC20.9■□□□□ 0.94
MMP8P22894 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.9■□□□□ 0.94
MMP8P22894 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
MMP8P22894 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.9■□□□□ 0.94
MMP8P22894 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP8P22894 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.9■□□□□ 0.94
MMP8P22894 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP8P22894 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP8P22894 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.9■□□□□ 0.94
MMP8P22894 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.9■□□□□ 0.94
MMP8P22894 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.9■□□□□ 0.94
MMP8P22894 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.9■□□□□ 0.94
MMP8P22894 AC060766.5-201ENST00000590539 871 ntBASIC20.9■□□□□ 0.94
MMP8P22894 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP8P22894 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.9■□□□□ 0.94
MMP8P22894 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP8P22894 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.89■□□□□ 0.94
MMP8P22894 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
MMP8P22894 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
MMP8P22894 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.89■□□□□ 0.94
MMP8P22894 AC018553.1-201ENST00000616682 1458 ntBASIC20.89■□□□□ 0.94
MMP8P22894 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
MMP8P22894 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.89■□□□□ 0.94
MMP8P22894 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.89■□□□□ 0.93
MMP8P22894 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MMP8P22894 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MMP8P22894 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.89■□□□□ 0.93
MMP8P22894 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MMP8P22894 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
MMP8P22894 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.89■□□□□ 0.93
MMP8P22894 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.89■□□□□ 0.93
MMP8P22894 AC006557.6-201ENST00000623071 864 ntBASIC20.89■□□□□ 0.93
MMP8P22894 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
MMP8P22894 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MMP8P22894 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MMP8P22894 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MMP8P22894 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MMP8P22894 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MMP8P22894 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MMP8P22894 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MMP8P22894 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MMP8P22894 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MMP8P22894 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
MMP8P22894 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.88■□□□□ 0.93
MMP8P22894 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
MMP8P22894 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MMP8P22894 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MMP8P22894 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MMP8P22894 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MMP8P22894 PNMA6B-201ENST00000538162 1200 ntBASIC20.88■□□□□ 0.93
MMP8P22894 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MMP8P22894 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
MMP8P22894 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MMP8P22894 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.88■□□□□ 0.93
MMP8P22894 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.88■□□□□ 0.93
MMP8P22894 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
MMP8P22894 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.88■□□□□ 0.93
MMP8P22894 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.88■□□□□ 0.93
MMP8P22894 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP8P22894 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MMP8P22894 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MMP8P22894 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MMP8P22894 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MMP8P22894 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MMP8P22894 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.87■□□□□ 0.93
MMP8P22894 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MMP8P22894 ID1-201ENST00000376105 1233 ntBASIC20.87■□□□□ 0.93
MMP8P22894 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.87■□□□□ 0.93
MMP8P22894 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
MMP8P22894 AL355802.2-201ENST00000402069 882 ntBASIC20.87■□□□□ 0.93
MMP8P22894 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.87■□□□□ 0.93
MMP8P22894 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.87■□□□□ 0.93
MMP8P22894 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
MMP8P22894 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.87■□□□□ 0.93
MMP8P22894 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.87■□□□□ 0.93
MMP8P22894 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP8P22894 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP8P22894 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.87■□□□□ 0.93
MMP8P22894 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP8P22894 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP8P22894 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP8P22894 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP8P22894 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.86■□□□□ 0.93
MMP8P22894 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP8P22894 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
MMP8P22894 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP8P22894 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MMP8P22894 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
MMP8P22894 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.86■□□□□ 0.93
MMP8P22894 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.86■□□□□ 0.93
MMP8P22894 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.86■□□□□ 0.93
MMP8P22894 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms