Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNFRSF1BP20333 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
TNFRSF1BP20333 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNFRSF1BP20333 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.41■□□□□ 0.54
TNFRSF1BP20333 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.41■□□□□ 0.54
TNFRSF1BP20333 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TNFRSF1BP20333 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 AC009237.14-201ENST00000609975 1594 ntBASIC18.4■□□□□ 0.54
TNFRSF1BP20333 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TNFRSF1BP20333 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TNFRSF1BP20333 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TNFRSF1BP20333 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TNFRSF1BP20333 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TNFRSF1BP20333 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TNFRSF1BP20333 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
TNFRSF1BP20333 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TNFRSF1BP20333 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.39■□□□□ 0.53
TNFRSF1BP20333 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.39■□□□□ 0.53
TNFRSF1BP20333 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
TNFRSF1BP20333 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFRSF1BP20333 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFRSF1BP20333 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFRSF1BP20333 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFRSF1BP20333 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.39■□□□□ 0.53
TNFRSF1BP20333 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.53
TNFRSF1BP20333 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TNFRSF1BP20333 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.39■□□□□ 0.53
TNFRSF1BP20333 AC034268.1-201ENST00000441047 882 ntBASIC18.39■□□□□ 0.53
TNFRSF1BP20333 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.39■□□□□ 0.53
TNFRSF1BP20333 MFSD11-216ENST00000590393 1141 ntBASIC18.39■□□□□ 0.53
TNFRSF1BP20333 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TNFRSF1BP20333 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TNFRSF1BP20333 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
TNFRSF1BP20333 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.39■□□□□ 0.53
TNFRSF1BP20333 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TNFRSF1BP20333 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TNFRSF1BP20333 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TNFRSF1BP20333 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.38■□□□□ 0.53
TNFRSF1BP20333 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 AC007322.4-201ENST00000509611 723 ntBASIC18.38■□□□□ 0.53
TNFRSF1BP20333 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 AC137761.2-201ENST00000561729 223 ntBASIC18.38■□□□□ 0.53
TNFRSF1BP20333 AC145350.3-201ENST00000569033 163 ntBASIC18.38■□□□□ 0.53
TNFRSF1BP20333 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 AC087623.3-201ENST00000607047 1098 ntBASIC18.38■□□□□ 0.53
TNFRSF1BP20333 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.38■□□□□ 0.53
TNFRSF1BP20333 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.38■□□□□ 0.53
TNFRSF1BP20333 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TNFRSF1BP20333 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms