Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.8■□□□□ 0.44
GYPBP06028 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
GYPBP06028 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.8■□□□□ 0.44
GYPBP06028 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GYPBP06028 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.8■□□□□ 0.44
GYPBP06028 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GYPBP06028 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GYPBP06028 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GYPBP06028 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
GYPBP06028 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GYPBP06028 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.8■□□□□ 0.44
GYPBP06028 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GYPBP06028 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GYPBP06028 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.79■□□□□ 0.44
GYPBP06028 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.79■□□□□ 0.44
GYPBP06028 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GYPBP06028 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GYPBP06028 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GYPBP06028 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GYPBP06028 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GYPBP06028 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GYPBP06028 AL162412.1-201ENST00000567129 965 ntBASIC17.79■□□□□ 0.44
GYPBP06028 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.79■□□□□ 0.44
GYPBP06028 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
GYPBP06028 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GYPBP06028 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.79■□□□□ 0.44
GYPBP06028 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.79■□□□□ 0.44
GYPBP06028 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GYPBP06028 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.79■□□□□ 0.44
GYPBP06028 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GYPBP06028 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
GYPBP06028 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GYPBP06028 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GYPBP06028 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
GYPBP06028 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
GYPBP06028 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
GYPBP06028 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GYPBP06028 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
GYPBP06028 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GYPBP06028 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.79■□□□□ 0.44
GYPBP06028 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GYPBP06028 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GYPBP06028 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GYPBP06028 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
GYPBP06028 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GYPBP06028 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.78■□□□□ 0.44
GYPBP06028 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GYPBP06028 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GYPBP06028 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GYPBP06028 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
GYPBP06028 KRT18P11-201ENST00000435214 1283 ntBASIC17.78■□□□□ 0.44
GYPBP06028 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.78■□□□□ 0.44
GYPBP06028 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.78■□□□□ 0.44
GYPBP06028 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.78■□□□□ 0.44
GYPBP06028 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GYPBP06028 KRT8P17-201ENST00000453110 1448 ntBASIC17.78■□□□□ 0.44
GYPBP06028 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
GYPBP06028 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GYPBP06028 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GYPBP06028 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
GYPBP06028 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.77■□□□□ 0.44
GYPBP06028 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GYPBP06028 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GYPBP06028 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.77■□□□□ 0.44
GYPBP06028 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
GYPBP06028 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
GYPBP06028 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.77■□□□□ 0.44
GYPBP06028 MCRIP2P1-201ENST00000394346 511 ntBASIC17.77■□□□□ 0.44
GYPBP06028 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GYPBP06028 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.77■□□□□ 0.44
GYPBP06028 RARRES2P4-201ENST00000514074 484 ntBASIC17.77■□□□□ 0.44
GYPBP06028 AC011767.1-201ENST00000617410 1153 ntBASIC17.77■□□□□ 0.44
GYPBP06028 MIR6821-201ENST00000617625 74 ntBASIC17.77■□□□□ 0.44
GYPBP06028 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GYPBP06028 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GYPBP06028 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
GYPBP06028 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GYPBP06028 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.77■□□□□ 0.43
GYPBP06028 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.77■□□□□ 0.43
GYPBP06028 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.77■□□□□ 0.43
GYPBP06028 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
GYPBP06028 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
GYPBP06028 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.76■□□□□ 0.43
GYPBP06028 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GYPBP06028 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
GYPBP06028 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GYPBP06028 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
GYPBP06028 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.76■□□□□ 0.43
GYPBP06028 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GYPBP06028 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
GYPBP06028 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GYPBP06028 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.76■□□□□ 0.43
GYPBP06028 KRT18P5-201ENST00000436075 1291 ntBASIC17.76■□□□□ 0.43
GYPBP06028 CNN2P6-201ENST00000439038 900 ntBASIC17.76■□□□□ 0.43
GYPBP06028 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GYPBP06028 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.76■□□□□ 0.43
GYPBP06028 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.76■□□□□ 0.43
GYPBP06028 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.76■□□□□ 0.43
GYPBP06028 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.76■□□□□ 0.43
GYPBP06028 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms