Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRAP04437 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TCRAP04437 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TCRAP04437 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.1■□□□□ 0.01
TCRAP04437 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRAP04437 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRAP04437 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.1■□□□□ 0.01
TCRAP04437 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TCRAP04437 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRAP04437 AL032819.2-201ENST00000624543 2162 ntBASIC15.09■□□□□ 0.01
TCRAP04437 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRAP04437 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRAP04437 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
TCRAP04437 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TCRAP04437 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRAP04437 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRAP04437 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRAP04437 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRAP04437 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TCRAP04437 NME4-202ENST00000382940 766 ntTSL 3 BASIC15.09■□□□□ 0.01
TCRAP04437 CDV3P1-201ENST00000471403 739 ntBASIC15.09■□□□□ 0.01
TCRAP04437 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.09■□□□□ 0.01
TCRAP04437 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC15.09■□□□□ 0.01
TCRAP04437 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.09■□□□□ 0.01
TCRAP04437 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC15.09■□□□□ 0.01
TCRAP04437 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.09■□□□□ 0.01
TCRAP04437 NME4-211ENST00000620944 1193 ntTSL 2 BASIC15.09■□□□□ 0.01
TCRAP04437 AL136967.2-201ENST00000623968 743 ntBASIC15.09■□□□□ 0.01
TCRAP04437 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRAP04437 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRAP04437 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRAP04437 LINC01465-201ENST00000408887 1940 ntBASIC15.09■□□□□ 0.01
TCRAP04437 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRAP04437 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRAP04437 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TCRAP04437 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
TCRAP04437 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.09■□□□□ 0.01
TCRAP04437 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRAP04437 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
TCRAP04437 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.08■□□□□ 0.01
TCRAP04437 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TCRAP04437 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.08■□□□□ 0
TCRAP04437 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.08■□□□□ 0
TCRAP04437 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TCRAP04437 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
TCRAP04437 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TCRAP04437 AC020763.4-201ENST00000623414 4170 ntBASIC15.08■□□□□ 0
TCRAP04437 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TCRAP04437 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC15.08■□□□□ 0
TCRAP04437 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TCRAP04437 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.08■□□□□ 0
TCRAP04437 AC097381.1-201ENST00000429019 1296 ntBASIC15.08■□□□□ 0
TCRAP04437 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC15.08■□□□□ 0
TCRAP04437 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TCRAP04437 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TCRAP04437 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.08■□□□□ 0
TCRAP04437 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TCRAP04437 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TCRAP04437 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.07■□□□□ 0
TCRAP04437 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.07■□□□□ 0
TCRAP04437 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
TCRAP04437 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TCRAP04437 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRAP04437 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.07■□□□□ 0
TCRAP04437 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
TCRAP04437 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRAP04437 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.07■□□□□ 0
TCRAP04437 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TCRAP04437 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRAP04437 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TCRAP04437 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.07■□□□□ 0
TCRAP04437 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.07■□□□□ 0
TCRAP04437 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC15.07■□□□□ 0
TCRAP04437 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC15.07■□□□□ 0
TCRAP04437 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC15.07■□□□□ 0
TCRAP04437 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC15.07■□□□□ 0
TCRAP04437 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC15.07■□□□□ 0
TCRAP04437 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC15.07■□□□□ 0
TCRAP04437 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.07■□□□□ 0
TCRAP04437 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
TCRAP04437 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.07■□□□□ 0
TCRAP04437 AL356652.1-201ENST00000615962 565 ntBASIC15.07■□□□□ 0
TCRAP04437 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRAP04437 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TCRAP04437 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TCRAP04437 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.07■□□□□ 0
TCRAP04437 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.07■□□□□ 0
TCRAP04437 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC15.07■□□□□ 0
TCRAP04437 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRAP04437 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TCRAP04437 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRAP04437 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TCRAP04437 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TCRAP04437 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TCRAP04437 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.07■□□□□ 0
TCRAP04437 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.07■□□□□ 0
TCRAP04437 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.07■□□□□ 0
TCRAP04437 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.07■□□□□ 0
TCRAP04437 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TCRAP04437 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms