Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH16O75309 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH16O75309 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CDH16O75309 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH16O75309 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH16O75309 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH16O75309 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH16O75309 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH16O75309 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH16O75309 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH16O75309 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDH16O75309 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH16O75309 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDH16O75309 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH16O75309 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.03■□□□□ 0.8
CDH16O75309 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH16O75309 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.03■□□□□ 0.8
CDH16O75309 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH16O75309 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CDH16O75309 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH16O75309 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CDH16O75309 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH16O75309 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CDH16O75309 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH16O75309 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH16O75309 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDH16O75309 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH16O75309 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.03■□□□□ 0.8
CDH16O75309 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH16O75309 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH16O75309 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CDH16O75309 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH16O75309 NEFHP1-201ENST00000412845 2629 ntBASIC20.03■□□□□ 0.8
CDH16O75309 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDH16O75309 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.02■□□□□ 0.8
CDH16O75309 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CDH16O75309 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDH16O75309 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDH16O75309 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.02■□□□□ 0.8
CDH16O75309 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH16O75309 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CDH16O75309 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH16O75309 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.02■□□□□ 0.8
CDH16O75309 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH16O75309 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH16O75309 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH16O75309 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDH16O75309 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
CDH16O75309 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CDH16O75309 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CDH16O75309 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDH16O75309 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CDH16O75309 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CDH16O75309 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH16O75309 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CDH16O75309 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH16O75309 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH16O75309 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDH16O75309 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CDH16O75309 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH16O75309 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDH16O75309 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH16O75309 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH16O75309 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH16O75309 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDH16O75309 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH16O75309 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDH16O75309 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH16O75309 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDH16O75309 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH16O75309 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.01■□□□□ 0.79
CDH16O75309 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH16O75309 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
CDH16O75309 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDH16O75309 PTBP1P-201ENST00000554374 1601 ntBASIC20.01■□□□□ 0.79
CDH16O75309 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CDH16O75309 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH16O75309 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDH16O75309 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CDH16O75309 AP001271.2-201ENST00000624018 1556 ntBASIC20■□□□□ 0.79
CDH16O75309 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH16O75309 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20■□□□□ 0.79
CDH16O75309 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
CDH16O75309 AL138781.2-201ENST00000617896 1843 ntBASIC20■□□□□ 0.79
CDH16O75309 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20■□□□□ 0.79
CDH16O75309 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
CDH16O75309 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20■□□□□ 0.79
CDH16O75309 AC027612.3-201ENST00000413684 1047 ntBASIC20■□□□□ 0.79
CDH16O75309 ZNRF2P3-201ENST00000424200 374 ntBASIC20■□□□□ 0.79
CDH16O75309 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20■□□□□ 0.79
CDH16O75309 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20■□□□□ 0.79
CDH16O75309 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CDH16O75309 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH16O75309 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CDH16O75309 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CDH16O75309 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDH16O75309 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDH16O75309 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CDH16O75309 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH16O75309 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms