Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
OPHN1O60890 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.67■□□□□ 0.9
OPHN1O60890 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
OPHN1O60890 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
OPHN1O60890 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
OPHN1O60890 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.67■□□□□ 0.9
OPHN1O60890 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.67■□□□□ 0.9
OPHN1O60890 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
OPHN1O60890 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
OPHN1O60890 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
OPHN1O60890 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
OPHN1O60890 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
OPHN1O60890 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
OPHN1O60890 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
OPHN1O60890 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
OPHN1O60890 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
OPHN1O60890 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
OPHN1O60890 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
OPHN1O60890 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
OPHN1O60890 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.66■□□□□ 0.9
OPHN1O60890 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
OPHN1O60890 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.66■□□□□ 0.9
OPHN1O60890 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.66■□□□□ 0.9
OPHN1O60890 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.66■□□□□ 0.9
OPHN1O60890 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
OPHN1O60890 AC100791.3-201ENST00000617619 330 ntBASIC20.66■□□□□ 0.9
OPHN1O60890 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
OPHN1O60890 DPP3P2-201ENST00000416030 1696 ntBASIC20.66■□□□□ 0.9
OPHN1O60890 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
OPHN1O60890 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
OPHN1O60890 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
OPHN1O60890 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
OPHN1O60890 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
OPHN1O60890 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
OPHN1O60890 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.66■□□□□ 0.9
OPHN1O60890 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
OPHN1O60890 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
OPHN1O60890 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.66■□□□□ 0.9
OPHN1O60890 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
OPHN1O60890 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
OPHN1O60890 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
OPHN1O60890 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
OPHN1O60890 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
OPHN1O60890 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
OPHN1O60890 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
OPHN1O60890 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.65■□□□□ 0.9
OPHN1O60890 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.65■□□□□ 0.9
OPHN1O60890 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
OPHN1O60890 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
OPHN1O60890 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
OPHN1O60890 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.65■□□□□ 0.9
OPHN1O60890 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
OPHN1O60890 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
OPHN1O60890 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
OPHN1O60890 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
OPHN1O60890 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.65■□□□□ 0.9
OPHN1O60890 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
OPHN1O60890 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.65■□□□□ 0.9
OPHN1O60890 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.65■□□□□ 0.9
OPHN1O60890 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
OPHN1O60890 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.64■□□□□ 0.9
OPHN1O60890 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
OPHN1O60890 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
OPHN1O60890 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
OPHN1O60890 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.64■□□□□ 0.9
OPHN1O60890 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.64■□□□□ 0.9
OPHN1O60890 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
OPHN1O60890 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
OPHN1O60890 AC112907.3-201ENST00000577781 2400 ntBASIC20.64■□□□□ 0.89
OPHN1O60890 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
OPHN1O60890 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
OPHN1O60890 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
OPHN1O60890 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.64■□□□□ 0.89
OPHN1O60890 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.64■□□□□ 0.89
OPHN1O60890 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.64■□□□□ 0.89
OPHN1O60890 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.64■□□□□ 0.89
OPHN1O60890 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.64■□□□□ 0.89
OPHN1O60890 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
OPHN1O60890 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.63■□□□□ 0.89
OPHN1O60890 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
OPHN1O60890 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
OPHN1O60890 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
OPHN1O60890 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
OPHN1O60890 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
OPHN1O60890 MIR718-201ENST00000390190 70 ntBASIC20.63■□□□□ 0.89
OPHN1O60890 MCRIP2P1-201ENST00000394346 511 ntBASIC20.63■□□□□ 0.89
OPHN1O60890 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
OPHN1O60890 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.63■□□□□ 0.89
OPHN1O60890 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.63■□□□□ 0.89
OPHN1O60890 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
OPHN1O60890 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
OPHN1O60890 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
OPHN1O60890 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
OPHN1O60890 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
OPHN1O60890 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
OPHN1O60890 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.63■□□□□ 0.89
OPHN1O60890 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
OPHN1O60890 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
OPHN1O60890 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
OPHN1O60890 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms