Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRAF3IP2O43734 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.7■□□□□ 0.42
TRAF3IP2O43734 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAF3IP2O43734 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRAF3IP2O43734 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TRAF3IP2O43734 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAF3IP2O43734 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRAF3IP2O43734 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF3IP2O43734 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF3IP2O43734 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.7■□□□□ 0.42
TRAF3IP2O43734 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF3IP2O43734 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF3IP2O43734 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAF3IP2O43734 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.7■□□□□ 0.42
TRAF3IP2O43734 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF3IP2O43734 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRAF3IP2O43734 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.7■□□□□ 0.42
TRAF3IP2O43734 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.7■□□□□ 0.42
TRAF3IP2O43734 PNMA6B-201ENST00000538162 1200 ntBASIC17.7■□□□□ 0.42
TRAF3IP2O43734 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.7■□□□□ 0.42
TRAF3IP2O43734 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.7■□□□□ 0.42
TRAF3IP2O43734 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAF3IP2O43734 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF3IP2O43734 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF3IP2O43734 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF3IP2O43734 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAF3IP2O43734 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAF3IP2O43734 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF3IP2O43734 PHGDH-210ENST00000641115 1638 ntBASIC17.69■□□□□ 0.42
TRAF3IP2O43734 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF3IP2O43734 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAF3IP2O43734 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAF3IP2O43734 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.69■□□□□ 0.42
TRAF3IP2O43734 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAF3IP2O43734 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.69■□□□□ 0.42
TRAF3IP2O43734 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAF3IP2O43734 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.69■□□□□ 0.42
TRAF3IP2O43734 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.69■□□□□ 0.42
TRAF3IP2O43734 AC006557.6-201ENST00000623071 864 ntBASIC17.69■□□□□ 0.42
TRAF3IP2O43734 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF3IP2O43734 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAF3IP2O43734 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF3IP2O43734 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF3IP2O43734 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF3IP2O43734 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRAF3IP2O43734 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF3IP2O43734 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAF3IP2O43734 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAF3IP2O43734 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAF3IP2O43734 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAF3IP2O43734 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAF3IP2O43734 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TRAF3IP2O43734 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRAF3IP2O43734 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAF3IP2O43734 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.68■□□□□ 0.42
TRAF3IP2O43734 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAF3IP2O43734 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAF3IP2O43734 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.68■□□□□ 0.42
TRAF3IP2O43734 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAF3IP2O43734 AC009237.14-201ENST00000609975 1594 ntBASIC17.68■□□□□ 0.42
TRAF3IP2O43734 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAF3IP2O43734 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAF3IP2O43734 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAF3IP2O43734 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAF3IP2O43734 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAF3IP2O43734 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAF3IP2O43734 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRAF3IP2O43734 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
TRAF3IP2O43734 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF3IP2O43734 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF3IP2O43734 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAF3IP2O43734 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRAF3IP2O43734 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAF3IP2O43734 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF3IP2O43734 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF3IP2O43734 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAF3IP2O43734 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF3IP2O43734 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAF3IP2O43734 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF3IP2O43734 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
TRAF3IP2O43734 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAF3IP2O43734 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRAF3IP2O43734 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAF3IP2O43734 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF3IP2O43734 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAF3IP2O43734 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAF3IP2O43734 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF3IP2O43734 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF3IP2O43734 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF3IP2O43734 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF3IP2O43734 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF3IP2O43734 AP001271.2-201ENST00000624018 1556 ntBASIC17.66■□□□□ 0.42
TRAF3IP2O43734 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF3IP2O43734 AC125437.2-201ENST00000625180 2167 ntBASIC17.66■□□□□ 0.42
TRAF3IP2O43734 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF3IP2O43734 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRAF3IP2O43734 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.66■□□□□ 0.42
TRAF3IP2O43734 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF3IP2O43734 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.66■□□□□ 0.42
TRAF3IP2O43734 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms