Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN4O14493 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN4O14493 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN4O14493 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN4O14493 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.7■□□□□ 0.58
CLDN4O14493 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN4O14493 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN4O14493 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CLDN4O14493 AC006058.3-201ENST00000606217 1069 ntBASIC18.7■□□□□ 0.58
CLDN4O14493 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN4O14493 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN4O14493 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CLDN4O14493 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN4O14493 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN4O14493 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CLDN4O14493 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN4O14493 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN4O14493 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN4O14493 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CLDN4O14493 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN4O14493 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN4O14493 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN4O14493 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN4O14493 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN4O14493 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN4O14493 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CLDN4O14493 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CLDN4O14493 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.69■□□□□ 0.58
CLDN4O14493 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.69■□□□□ 0.58
CLDN4O14493 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN4O14493 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.69■□□□□ 0.58
CLDN4O14493 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN4O14493 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.69■□□□□ 0.58
CLDN4O14493 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN4O14493 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN4O14493 AL121906.2-201ENST00000621597 723 ntBASIC18.69■□□□□ 0.58
CLDN4O14493 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN4O14493 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN4O14493 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN4O14493 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CLDN4O14493 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN4O14493 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
CLDN4O14493 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN4O14493 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN4O14493 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CLDN4O14493 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN4O14493 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN4O14493 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN4O14493 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.68■□□□□ 0.58
CLDN4O14493 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.68■□□□□ 0.58
CLDN4O14493 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN4O14493 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN4O14493 KRT18P29-201ENST00000397031 1267 ntBASIC18.68■□□□□ 0.58
CLDN4O14493 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN4O14493 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN4O14493 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN4O14493 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN4O14493 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN4O14493 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN4O14493 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN4O14493 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN4O14493 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CLDN4O14493 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN4O14493 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN4O14493 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN4O14493 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN4O14493 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN4O14493 PHGDH-210ENST00000641115 1638 ntBASIC18.67■□□□□ 0.58
CLDN4O14493 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN4O14493 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN4O14493 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN4O14493 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CLDN4O14493 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN4O14493 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CLDN4O14493 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.67■□□□□ 0.58
CLDN4O14493 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN4O14493 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN4O14493 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.67■□□□□ 0.58
CLDN4O14493 PRKY-204ENST00000533551 1019 ntBASIC18.67■□□□□ 0.58
CLDN4O14493 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN4O14493 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN4O14493 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.67■□□□□ 0.58
CLDN4O14493 AL121829.2-201ENST00000620908 328 ntBASIC18.67■□□□□ 0.58
CLDN4O14493 ITM2C-210ENST00000620962 501 ntBASIC18.67■□□□□ 0.58
CLDN4O14493 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN4O14493 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.67■□□□□ 0.58
CLDN4O14493 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN4O14493 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CLDN4O14493 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN4O14493 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.66■□□□□ 0.58
CLDN4O14493 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN4O14493 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CLDN4O14493 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CLDN4O14493 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN4O14493 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CLDN4O14493 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN4O14493 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CLDN4O14493 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN4O14493 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN4O14493 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms