Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC25.62■■□□□ 1.69
CHL1O00533 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHL1O00533 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CHL1O00533 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC25.62■■□□□ 1.69
CHL1O00533 REXO2-216ENST00000544196 452 ntTSL 3 BASIC25.62■■□□□ 1.69
CHL1O00533 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC25.62■■□□□ 1.69
CHL1O00533 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC25.62■■□□□ 1.69
CHL1O00533 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC25.62■■□□□ 1.69
CHL1O00533 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC25.62■■□□□ 1.69
CHL1O00533 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
CHL1O00533 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CHL1O00533 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC25.62■■□□□ 1.69
CHL1O00533 USP39-204ENST00000409766 2033 ntTSL 2 BASIC25.61■■□□□ 1.69
CHL1O00533 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CHL1O00533 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHL1O00533 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHL1O00533 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC25.61■■□□□ 1.69
CHL1O00533 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHL1O00533 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
CHL1O00533 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHL1O00533 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC25.61■■□□□ 1.69
CHL1O00533 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHL1O00533 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC25.61■■□□□ 1.69
CHL1O00533 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC25.61■■□□□ 1.69
CHL1O00533 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CHL1O00533 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC25.61■■□□□ 1.69
CHL1O00533 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC25.61■■□□□ 1.69
CHL1O00533 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC25.61■■□□□ 1.69
CHL1O00533 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC25.61■■□□□ 1.69
CHL1O00533 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
CHL1O00533 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC25.61■■□□□ 1.69
CHL1O00533 AP006587.1-201ENST00000534129 1502 ntBASIC25.61■■□□□ 1.69
CHL1O00533 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC25.61■■□□□ 1.69
CHL1O00533 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHL1O00533 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
CHL1O00533 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHL1O00533 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHL1O00533 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CHL1O00533 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC25.6■■□□□ 1.69
CHL1O00533 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC25.6■■□□□ 1.69
CHL1O00533 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC25.6■■□□□ 1.69
CHL1O00533 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC25.6■■□□□ 1.69
CHL1O00533 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHL1O00533 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC25.6■■□□□ 1.69
CHL1O00533 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
CHL1O00533 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC25.6■■□□□ 1.69
CHL1O00533 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
CHL1O00533 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHL1O00533 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC25.6■■□□□ 1.69
CHL1O00533 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC25.59■■□□□ 1.69
CHL1O00533 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CHL1O00533 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
CHL1O00533 MIR718-201ENST00000390190 70 ntBASIC25.59■■□□□ 1.69
CHL1O00533 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC25.59■■□□□ 1.69
CHL1O00533 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
CHL1O00533 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC25.59■■□□□ 1.69
CHL1O00533 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC25.59■■□□□ 1.69
CHL1O00533 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC25.59■■□□□ 1.69
CHL1O00533 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
CHL1O00533 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHL1O00533 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CHL1O00533 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHL1O00533 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHL1O00533 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHL1O00533 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC25.59■■□□□ 1.69
CHL1O00533 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHL1O00533 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHL1O00533 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC25.59■■□□□ 1.69
CHL1O00533 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC25.59■■□□□ 1.69
CHL1O00533 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC25.59■■□□□ 1.69
CHL1O00533 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHL1O00533 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC25.58■■□□□ 1.69
CHL1O00533 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
CHL1O00533 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CHL1O00533 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CHL1O00533 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CHL1O00533 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
CHL1O00533 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CHL1O00533 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CHL1O00533 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CHL1O00533 MDFI-202ENST00000373050 809 ntTSL 2 BASIC25.58■■□□□ 1.69
CHL1O00533 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC25.58■■□□□ 1.69
CHL1O00533 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
CHL1O00533 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
CHL1O00533 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC25.58■■□□□ 1.68
CHL1O00533 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC25.58■■□□□ 1.68
CHL1O00533 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC25.57■■□□□ 1.68
CHL1O00533 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC25.57■■□□□ 1.68
CHL1O00533 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHL1O00533 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CHL1O00533 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHL1O00533 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHL1O00533 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CHL1O00533 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC25.57■■□□□ 1.68
CHL1O00533 AC004264.1-201ENST00000608354 794 ntBASIC25.57■■□□□ 1.68
CHL1O00533 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC25.57■■□□□ 1.68
CHL1O00533 HTR7P1-201ENST00000538670 1336 ntBASIC25.57■■□□□ 1.68
CHL1O00533 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHL1O00533 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHL1O00533 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC25.56■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms