Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.36■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 RPS2P7-201ENST00000447334 885 ntBASIC17.36■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 SPCS2P3-201ENST00000500401 656 ntBASIC17.36■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 U85056.1-201ENST00000616429 682 ntBASIC17.36■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.36■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.35■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 AL162727.3-201ENST00000635661 2787 ntBASIC17.35■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 DUX4L9-201ENST00000449051 1259 ntBASIC17.35■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 ABHD17AP5-201ENST00000580133 923 ntBASIC17.35■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 AC009086.3-201ENST00000623486 1008 ntBASIC17.35■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.35■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.35■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.35■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.35■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.34■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.34■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.34■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.34■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.34■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.34■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.33■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.33■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 WIZP1-201ENST00000531444 2299 ntBASIC17.33■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.33■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.33■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 AC004687.1-201ENST00000579003 1625 ntBASIC17.33■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
BOLA2-SMG1P6H3BVE0 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BOLA2-SMG1P6H3BVE0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.33■□□□□ 0.36
BOLA2-SMG1P6H3BVE0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
BOLA2-SMG1P6H3BVE0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BOLA2-SMG1P6H3BVE0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
BOLA2-SMG1P6H3BVE0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
BOLA2-SMG1P6H3BVE0 AC080080.1-201ENST00000625121 2420 ntBASIC17.33■□□□□ 0.36
BOLA2-SMG1P6H3BVE0 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
BOLA2-SMG1P6H3BVE0 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
BOLA2-SMG1P6H3BVE0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
BOLA2-SMG1P6H3BVE0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BOLA2-SMG1P6H3BVE0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
BOLA2-SMG1P6H3BVE0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
BOLA2-SMG1P6H3BVE0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
BOLA2-SMG1P6H3BVE0 HTR7P1-202ENST00000624664 4411 ntBASIC17.33■□□□□ 0.36
BOLA2-SMG1P6H3BVE0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BOLA2-SMG1P6H3BVE0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BOLA2-SMG1P6H3BVE0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.32■□□□□ 0.36
BOLA2-SMG1P6H3BVE0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BOLA2-SMG1P6H3BVE0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.32■□□□□ 0.36
BOLA2-SMG1P6H3BVE0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.32■□□□□ 0.36
BOLA2-SMG1P6H3BVE0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BOLA2-SMG1P6H3BVE0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms