Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRRC53A6NM62 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LRRC53A6NM62 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LRRC53A6NM62 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.39■■□□□ 1.01
LRRC53A6NM62 AC231657.2-201ENST00000624556 255 ntBASIC21.39■■□□□ 1.01
LRRC53A6NM62 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.39■■□□□ 1.01
LRRC53A6NM62 AC008694.1-202ENST00000636953 945 ntBASIC21.39■■□□□ 1.01
LRRC53A6NM62 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRRC53A6NM62 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.39■■□□□ 1.01
LRRC53A6NM62 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.39■■□□□ 1.01
LRRC53A6NM62 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRRC53A6NM62 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.39■■□□□ 1.01
LRRC53A6NM62 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
LRRC53A6NM62 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRRC53A6NM62 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LRRC53A6NM62 AC010980.2-201ENST00000587099 1412 ntBASIC21.38■■□□□ 1.01
LRRC53A6NM62 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
LRRC53A6NM62 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.38■■□□□ 1.01
LRRC53A6NM62 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LRRC53A6NM62 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRRC53A6NM62 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LRRC53A6NM62 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRRC53A6NM62 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRRC53A6NM62 AC007322.1-201ENST00000426983 750 ntBASIC21.38■■□□□ 1.01
LRRC53A6NM62 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRRC53A6NM62 AP001271.2-201ENST00000624018 1556 ntBASIC21.38■■□□□ 1.01
LRRC53A6NM62 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRRC53A6NM62 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.38■■□□□ 1.01
LRRC53A6NM62 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
LRRC53A6NM62 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.38■■□□□ 1.01
LRRC53A6NM62 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
LRRC53A6NM62 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRRC53A6NM62 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.38■■□□□ 1.01
LRRC53A6NM62 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LRRC53A6NM62 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRRC53A6NM62 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LRRC53A6NM62 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRC53A6NM62 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRC53A6NM62 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRC53A6NM62 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRC53A6NM62 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRC53A6NM62 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRC53A6NM62 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRC53A6NM62 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRC53A6NM62 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.37■■□□□ 1.01
LRRC53A6NM62 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.37■■□□□ 1.01
LRRC53A6NM62 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.37■■□□□ 1.01
LRRC53A6NM62 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRC53A6NM62 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRC53A6NM62 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRC53A6NM62 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.37■■□□□ 1.01
LRRC53A6NM62 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
LRRC53A6NM62 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
LRRC53A6NM62 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRC53A6NM62 AL020996.1-203ENST00000536896 2307 ntBASIC21.37■■□□□ 1.01
LRRC53A6NM62 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
LRRC53A6NM62 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRC53A6NM62 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRC53A6NM62 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRC53A6NM62 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.36■■□□□ 1.01
LRRC53A6NM62 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
LRRC53A6NM62 KRT17P1-201ENST00000399211 1546 ntBASIC21.36■■□□□ 1.01
LRRC53A6NM62 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LRRC53A6NM62 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRC53A6NM62 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LRRC53A6NM62 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.36■■□□□ 1.01
LRRC53A6NM62 HLA-G-202ENST00000376815 851 ntBASIC21.36■■□□□ 1.01
LRRC53A6NM62 HLA-G-203ENST00000376818 1127 ntBASIC21.36■■□□□ 1.01
LRRC53A6NM62 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRC53A6NM62 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRC53A6NM62 AC093787.1-201ENST00000450396 207 ntBASIC21.36■■□□□ 1.01
LRRC53A6NM62 AL162430.1-201ENST00000480705 870 ntBASIC21.36■■□□□ 1.01
LRRC53A6NM62 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.36■■□□□ 1.01
LRRC53A6NM62 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.36■■□□□ 1.01
LRRC53A6NM62 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.36■■□□□ 1.01
LRRC53A6NM62 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.36■■□□□ 1.01
LRRC53A6NM62 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
LRRC53A6NM62 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
LRRC53A6NM62 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRRC53A6NM62 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRRC53A6NM62 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRRC53A6NM62 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRRC53A6NM62 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRRC53A6NM62 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRRC53A6NM62 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
LRRC53A6NM62 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRRC53A6NM62 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LRRC53A6NM62 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.35■■□□□ 1.01
LRRC53A6NM62 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRRC53A6NM62 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.35■■□□□ 1.01
LRRC53A6NM62 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRRC53A6NM62 C2orf69P4-201ENST00000565394 541 ntBASIC21.35■■□□□ 1.01
LRRC53A6NM62 AL589743.5-201ENST00000616611 1050 ntBASIC21.35■■□□□ 1.01
LRRC53A6NM62 OR10C1-204ENST00000622521 1039 ntBASIC21.35■■□□□ 1.01
LRRC53A6NM62 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRRC53A6NM62 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRRC53A6NM62 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRRC53A6NM62 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRRC53A6NM62 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRRC53A6NM62 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms