Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 AC007613.1-201ENST00000572811 2597 ntBASIC14.09□□□□□ -0.15
LINC01549A6NIU2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01549A6NIU2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LINC01549A6NIU2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LINC01549A6NIU2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.08□□□□□ -0.15
LINC01549A6NIU2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LINC01549A6NIU2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
LINC01549A6NIU2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LINC01549A6NIU2 KRT8P36-201ENST00000489121 1440 ntBASIC14.08□□□□□ -0.15
LINC01549A6NIU2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LINC01549A6NIU2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 AC120498.10-201ENST00000621827 505 ntBASIC14.08□□□□□ -0.16
LINC01549A6NIU2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 HTR7P1-202ENST00000624664 4411 ntBASIC14.08□□□□□ -0.16
LINC01549A6NIU2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
LINC01549A6NIU2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 KRT16P2-201ENST00000414673 1423 ntBASIC14.07□□□□□ -0.16
LINC01549A6NIU2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC01549A6NIU2 AC133561.4-201ENST00000566112 224 ntBASIC14.07□□□□□ -0.16
LINC01549A6NIU2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms