Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
TRAV41A0A0B4J266 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV41A0A0B4J266 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC15.64■□□□□ 0.09
TRAV41A0A0B4J266 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV41A0A0B4J266 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV41A0A0B4J266 AC099778.1-201ENST00000568593 1911 ntBASIC15.64■□□□□ 0.09
TRAV41A0A0B4J266 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TRAV41A0A0B4J266 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TRAV41A0A0B4J266 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV41A0A0B4J266 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
TRAV41A0A0B4J266 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV41A0A0B4J266 AL391422.3-201ENST00000603791 2761 ntBASIC15.64■□□□□ 0.09
TRAV41A0A0B4J266 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 POM121L13P-201ENST00000422362 380 ntBASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 POU5F1P3-201ENST00000428824 1078 ntBASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 AC008403.3-201ENST00000598924 454 ntBASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV41A0A0B4J266 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 STK25-204ENST00000405585 1643 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 TSPY20P-201ENST00000450910 630 ntBASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV41A0A0B4J266 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV41A0A0B4J266 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRAV41A0A0B4J266 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV41A0A0B4J266 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV41A0A0B4J266 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV41A0A0B4J266 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
TRAV41A0A0B4J266 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV41A0A0B4J266 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV41A0A0B4J266 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV41A0A0B4J266 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV41A0A0B4J266 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV41A0A0B4J266 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV41A0A0B4J266 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV41A0A0B4J266 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRAV41A0A0B4J266 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV41A0A0B4J266 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TRAV41A0A0B4J266 AC006058.3-201ENST00000606217 1069 ntBASIC15.61■□□□□ 0.09
TRAV41A0A0B4J266 AL121906.2-201ENST00000621597 723 ntBASIC15.61■□□□□ 0.09
TRAV41A0A0B4J266 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV41A0A0B4J266 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV41A0A0B4J266 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV41A0A0B4J266 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV41A0A0B4J266 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV41A0A0B4J266 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms