Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-2A0A0B4J237 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-2A0A0B4J237 KRT18P68-201ENST00000392293 1000 ntBASIC15.07■□□□□ 0
TRAV8-2A0A0B4J237 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC15.07■□□□□ 0
TRAV8-2A0A0B4J237 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TRAV8-2A0A0B4J237 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.07■□□□□ 0
TRAV8-2A0A0B4J237 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-2A0A0B4J237 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
TRAV8-2A0A0B4J237 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC15.07■□□□□ 0
TRAV8-2A0A0B4J237 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TRAV8-2A0A0B4J237 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-2A0A0B4J237 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 AL162430.1-201ENST00000480705 870 ntBASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 BID-214ENST00000617586 542 ntTSL 5 BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 AC116562.4-201ENST00000641316 2276 ntBASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 KRT8P17-201ENST00000453110 1448 ntBASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.06■□□□□ 0
TRAV8-2A0A0B4J237 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV8-2A0A0B4J237 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV8-2A0A0B4J237 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.05■□□□□ -0
TRAV8-2A0A0B4J237 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-2A0A0B4J237 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC15.05■□□□□ -0
TRAV8-2A0A0B4J237 AL355472.2-201ENST00000422958 438 ntBASIC15.05■□□□□ -0
TRAV8-2A0A0B4J237 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.05■□□□□ -0
TRAV8-2A0A0B4J237 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
TRAV8-2A0A0B4J237 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-2A0A0B4J237 CYP2T3P-201ENST00000601990 817 ntBASIC15.05■□□□□ -0
TRAV8-2A0A0B4J237 ANKRD20A6P-201ENST00000618763 204 ntBASIC15.05■□□□□ -0
TRAV8-2A0A0B4J237 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-2A0A0B4J237 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-2A0A0B4J237 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC15.05■□□□□ -0
TRAV8-2A0A0B4J237 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-2A0A0B4J237 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-2A0A0B4J237 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-2A0A0B4J237 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-2A0A0B4J237 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.05■□□□□ -0
TRAV8-2A0A0B4J237 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.05■□□□□ -0
TRAV8-2A0A0B4J237 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.05■□□□□ -0
TRAV8-2A0A0B4J237 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-2A0A0B4J237 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-2A0A0B4J237 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.05■□□□□ -0
TRAV8-2A0A0B4J237 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-2A0A0B4J237 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-2A0A0B4J237 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-2A0A0B4J237 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
TRAV8-2A0A0B4J237 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-2A0A0B4J237 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-2A0A0B4J237 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRAV8-2A0A0B4J237 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-2A0A0B4J237 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-2A0A0B4J237 TREX1-205ENST00000625293 1783 ntBASIC15.04■□□□□ -0
TRAV8-2A0A0B4J237 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-2A0A0B4J237 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRAV8-2A0A0B4J237 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-2A0A0B4J237 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-2A0A0B4J237 BET1L-204ENST00000410108 637 ntTSL 3 BASIC15.04■□□□□ -0
TRAV8-2A0A0B4J237 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.04■□□□□ -0
TRAV8-2A0A0B4J237 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-2A0A0B4J237 AC069236.1-201ENST00000604339 616 ntBASIC15.04■□□□□ -0
TRAV8-2A0A0B4J237 AC231657.2-201ENST00000624556 255 ntBASIC15.04■□□□□ -0
TRAV8-2A0A0B4J237 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.04■□□□□ -0
TRAV8-2A0A0B4J237 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
TRAV8-2A0A0B4J237 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-2A0A0B4J237 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-2A0A0B4J237 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms